Bibersteinia trehalosi USDA-ARS-USMARC-188: F542_14650
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Entry
F542_14650 CDS
T03017
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
btre
Bibersteinia trehalosi USDA-ARS-USMARC-188
Brite
KEGG Orthology (KO) [BR:
btre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
btre03009
]
F542_14650
Enzymes [BR:
btre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F542_14650
Ribosome biogenesis [BR:
btre03009
]
Prokaryotic type
rRNA helicases
F542_14650
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AHG82181
UniProt:
A0A4V7IB32
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All DBs
Position
complement(1568661..1569983)
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AA seq
440 aa
AA seq
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MNPILIFEELDLSPELLRAIKEKGYKRPTAIQADVIPNALDGTDILGSAPTGTGKTAAFL
LPALQHLLDFPRRKPGPPRILVLTPTRELAMQVAEQAEELAKFTNLSIATITGGVAYQNH
GEVFNTNQDLVVATPGRLLQYIKEENFDCRSVEVLIFDEADRMLQMGYGQDAETIAAETR
WRKHTWLFSATLEGELLTDFSERILENPVQIDAEPSRRERKKINQWYYHADNLEHKTKLL
ARLVSNFEIEKAVVFVRKRETVRELSETLRKRGIRSTYLEGEMAQTQRNQAIERLKSGVV
NVLVATDVAARGIDIDDVDFVINFDLPYSADTYLHRIGRTARAGKKGSAVSLVEAHDYKL
LGKIKRYTEEPLKPRTIEGLEPRTKAPKDGEMPTVSKKEKARVKKKKEEKKALDKKKVKA
RHKDTKNIGKRRKPSSEKSA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaattttaatttttgaagaattagatctttctcccgaattgctcagagcaatt
aaagaaaaaggctataaacgccccactgccattcaagctgatgtgatcccaaatgcctta
gatggcaccgatattttgggctcagccccaacaggtacaggcaaaaccgctgcgttttta
ttgccggcattgcaacacctattggatttccctcgccgcaaaccaggcccgccacgcatt
ttggttttaacgcccactcgtgagctggcgatgcaagtggcagagcaagcagaagaactc
gccaaattcaccaatttgagtattgcaaccattacaggtggcgttgcctatcaaaatcac
ggtgaagtctttaatactaatcaagatctggtagtcgcaacaccgggtagattattacaa
tacatcaaggaagaaaattttgactgccgttcagtagaagtactgatttttgatgaagca
gaccgaatgttgcaaatgggctatgggcaagatgcagaaaccattgccgctgaaacacgt
tggcgtaaacatacttggttattttcagcgacccttgaaggcgaattactcactgatttt
tccgagcgtattttagaaaaccctgtgcaaattgatgcagaaccaagtcgtcgtgaacgt
aaaaaaattaatcaatggtattaccacgcagataaccttgaacataaaactaagttactg
gctcgtttagtcagcaattttgagattgaaaaagcggtcgtgtttgtgcgtaaacgtgaa
accgtacgagagttgagcgaaacattgcgtaaacgtggtattcgttccacttacctagaa
ggcgaaatggcacaaacacaacgtaatcaagcgattgagcggttaaaatcgggtgtcgtg
aatgtgctagtggcaaccgatgttgccgctcgtggtattgatattgatgatgtggatttt
gtcatcaattttgatttgccatacagtgcggatacctatctgcaccgcattgggcgtacc
gctcgagcgggtaaaaaaggctcggcggtcagtttagtggaagcccacgattataagcta
cttggcaaaattaaacgctataccgaagagccattaaaaccacgcactattgaagggctt
gaaccacgcaccaaagccccgaaagatggtgaaatgccgaccgtgagcaaaaaagaaaaa
gcgcgggtgaaaaagaaaaaagaagagaaaaaagcacttgataagaaaaaagtgaaagct
cggcataaagatactaaaaatatcggtaaacgtagaaaaccaagctcggaaaaatcggct
taa
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