Bibersteinia trehalosi USDA-ARS-USMARC-188: F542_15280
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Entry
F542_15280 CDS
T03017
Name
(GenBank) Periplasmic protein
KO
K21470
L,D-transpeptidase YcbB
Organism
btre
Bibersteinia trehalosi USDA-ARS-USMARC-188
Brite
KEGG Orthology (KO) [BR:
btre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
btre01002
]
F542_15280
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
btre01011
]
F542_15280
Peptidases and inhibitors [BR:
btre01002
]
Cysteine peptidases
Family C82
F542_15280
Peptidoglycan biosynthesis and degradation proteins [BR:
btre01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
F542_15280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
TENA_THI-4
Motif
Other DBs
NCBI-ProteinID:
AHG82244
UniProt:
A0A4V7IB53
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All DBs
Position
complement(1660113..1661798)
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AA seq
561 aa
AA seq
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MRKLPDRLFCKRSVLLNILQMSKLFFGLNMKAFKFLPITILSSAVFAETSAVASATTQVA
EINVATPNALNTVDTVLPQLSFEAQQARAAAMARQAESFIQRAEEERIAAEKLAQAKNRL
NQEIAPNQLLLASTTAKVYLDNEFSSIWSDKRATQLFLKEYAAFAASGVSAKSTKALQQI
LNTPEDSFARDVLLTDSFLDYLYYNKNVGRNADKWLYRLGSYVTKAPAESHVSAWLRAVR
NGSAVQYISALIPNNHIYRETVDRLFTMSPNSTAGVAKKAANSKNTKGQKGKAQESAVAG
GSTTFAKLALNAQRLRLIPSFTNGIFVNIPSYQLYYMRDGKQVLQSKVIVGRDDRRTPVM
YSKLSNVVVNPPWNVPPTIKAKDLIPKFSRNPGMVERSGYEILDGRGNKISPSNINWAQY
KGKENTFPYHIRQKPGDNAALGLYKFNMPSSDAIYLHDTPNRGLFGKNDRALSSGCVRVA
KSDELATLLLKEAGWSDSKKQGVLASRKTTSVPIRSDNPVYLYYVTAWVENGKVYTLPDI
YKYDVNLPRVSIDWMKVKNVI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaaaattaccagaccgcttgttttgtaagcggtctgttttattaaacattttgcaa
atgagcaaattattttttggattaaacatgaaagcgtttaagtttttacctattacgata
ttgagttctgctgtttttgcagaaacatcggcagtagcaagtgcgacaactcaagttgca
gaaataaatgttgccacaccaaatgcgttaaatactgttgatacggtattgccgcaatta
agttttgaagctcagcaagcaagagcagcagcaatggctcggcaagcagaaagttttatt
caacgtgcagaagaagagcgaattgcagcagaaaaacttgcgcaagctaaaaatcgcctt
aatcaagaaattgcaccaaatcaattattgttagcatctacaacagctaaggtttattta
gataacgaatttagttcaatatggtctgataaacgggcaacacagctatttttaaaagag
tatgctgcttttgcagccagtggagtttctgcaaaatcaacgaaagcactacaacaaatt
ctaaatacgccagaagatagtttcgctcgtgatgttttattaacagacagttttttagat
tatctgtattacaataaaaatgtgggacgtaatgcagataaatggctatatcggttaggc
agctacgtaactaaagctccggctgaaagtcatgtttctgcttggttacgggctgtcaga
aatggctctgctgtacaatatatttctgctcttataccaaataatcatatttaccgtgaa
acggtagatagattgtttacaatgtctccaaatagcacggcgggtgtcgctaaaaaagct
gcgaacagcaaaaataccaaaggacaaaaagggaaagctcaagagtctgcagtagcaggg
ggaagcacgacatttgcgaaattagcattgaatgcacaacgcttacgtttaatcccaagc
tttactaatggtattttcgttaatattccaagttatcagctttactatatgcgtgatggc
aagcaggttttgcaatctaaagtgattgttggacgagatgaccgccgcacaccagttatg
tatagcaaattaagtaatgtggttgtgaatccgccttggaatgtaccgccgacaattaaa
gctaaagatcttattcctaaatttagccgtaatccaggtatggtagagcgttcaggctat
gagattttagatgggcgtggtaataagattagcccaagtaatatcaattgggcgcaatat
aaaggtaaagagaatactttcccttatcatattcgccaaaaaccgggtgacaatgctgca
ttgggattgtataaattcaatatgccaagctctgatgctatttatttgcatgatacacct
aaccgaggtctatttggtaaaaatgatcgtgcgttaagctcagggtgtgttcgtgtggca
aaatcagatgaactcgcgacattattattgaaagaagcgggttggagtgatagtaagaag
caaggtgtattagccagccgtaaaacaacttcggtgccaattcgttcagacaatcctgtt
tatttgtattatgtcacggcgtgggtagaaaatggtaaagtgtataccttgcctgatatc
tataaatatgatgttaatcttccgcgagtctcaatagattggatgaaggttaaaaatgtg
atctag
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