Bibersteinia trehalosi USDA-ARS-USMARC-188: F542_15810
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Entry
F542_15810 CDS
T03017
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
btre
Bibersteinia trehalosi USDA-ARS-USMARC-188
Pathway
btre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F542_15810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btre03400
]
F542_15810
Enzymes [BR:
btre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F542_15810
DNA repair and recombination proteins [BR:
btre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F542_15810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_22
AAA_19
nSTAND_NTPase5
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
AHG82297
UniProt:
A0A4V7IBD9
LinkDB
All DBs
Position
1710306..1712531
Genome browser
AA seq
741 aa
AA seq
DB search
MTPPAMKLIRLALNVPLARFFDYLLPEEISTEIGARAVVPFGRQTKIGVVVDLPIQSDIP
SDKLKPITAILDQQSLFDDEIWQLLNWAANYYHAPLGEVLMSALPVKLRNGESSKRTQPD
YFVVTDIGRNALLSGELARAKKQQLLLETLAQFAHFFEKPTACALSVWKGLMEKGYIKKT
EIPYQAVSWQQKLANQPICNRQNRLTLNKQQSLVVGRLNYHEGFGAFLLNGVTGSGKTEV
YLQVIEEILNQGKQVLVLVPEIGLTPQTIHRFKARFNVEIDALHSNLNDNQRLNAWLRAK
NGESAIVIGTRSALFTQFHKLGLIIIDEEHDSSFKQQDGWRYHARDLAVLRARNANIPII
LGSATPSLESVQNVQNGKFIELQLSQRAGGANNVKQQVIDLKTQRIYSGLSEQLLAKMQH
HLEKGNQVMLFLNRRGFAPVLLCHECGWICQCEACDKPYTYHQKSRILRCHHCASQRVIP
RQCGHCGSTHLITTGMGTEQLEHVLTERFPQFTISRIDRDSTARKGSLEQHLTDIQAGKS
QILIGTQMLAKGHHFPNVTLVAIVNVDSSLFSTDFRAEERLAQLYLQVAGRAGRAEKQGE
VVLQTHYPEHPLLKTLLNEGYLAFSIEALKMRKVMNLPPFSAQVLIRATGRDNDKVAEFL
HNLTACLQTMIQDNQWQGFQILGAFSAPMAKKAGHYRWQSIIQHSQRTMLQKLLSLFDEV
KTQFLRNDIRLTVDIDPQDVT
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgacgccaccagcaatgaaacttatccgccttgctttaaatgtacctcttgcccgtttt
tttgattacctcttgccagaggaaatatctacggagatcggcgcaagagccgttgtacct
tttggacggcaaacaaaaataggtgttgtggtggatttgccaatccaaagtgatattccc
agcgataaattgaagccaatcaccgcgatattagatcaacaatccttatttgacgatgaa
atttggcaacttttaaactgggcggcaaattattatcacgcgccgctgggagaagtgcta
atgagtgctttgcctgttaaattacgtaacggcgaaagtagcaaacgtacacagcctgac
tattttgttgttaccgacattgggcgaaacgcattattaagtggtgaattagcaagagcc
aaaaaacagcaactcttactggaaaccctagcgcaatttgctcatttttttgaaaaacca
accgcttgcgctctatccgtttggaaggggttaatggaaaaaggctatatcaaaaaaacc
gaaatcccttatcaagcggtgagttggcaacagaaattagcgaatcaacctatttgcaat
cgtcaaaatcgactgacgttaaataaacaacaaagtttagtggtaggacgtttaaattac
catgaaggttttggggcatttctactaaatggggtgacaggctcaggcaagacagaagtc
taccttcaggtgattgaagagatattaaaccaaggcaaacaagtattagtgcttgtacct
gaaattggtctaacaccacaaacaattcaccgctttaaagcccgctttaatgtcgaaatt
gatgctttacattctaatctaaacgacaatcagcggttaaatgcgtggctgcgggcgaaa
aatggagaaagtgcgattgtaatcggcacgcgttccgccctattcacgcaatttcacaag
ctcggactaattatcatcgatgaagagcacgatagctcgttcaaacagcaagacggttgg
cgttatcacgcacgtgatttagccgtattgcgtgcaagaaatgcaaacattccgattatt
ttaggctcagcaacgccaagtttagaaagcgtgcaaaatgtacagaatggtaaattcatt
gaattacaactgagccaacgcgcaggtggtgcaaacaatgttaaacagcaggtcatcgat
ctgaaaacacagcgtatctattctgggctttctgaacagcttttagccaaaatgcaacac
cacctagaaaaaggcaaccaagtgatgttgttcttaaatcgacgaggctttgctcctgtg
ctactttgccatgaatgcggttggatctgccagtgtgaagcctgtgataaaccctacacc
taccatcaaaaaagccgtattttacgttgccatcactgcgcatctcaacgtgtaatcccg
agacaatgtggccattgcggttctacccatttaatcacaacaggcatggggactgaacag
ctggaacacgtgcttacagagcgttttccacagtttacgatctctcgtattgaccgagat
agtaccgctcgtaaaggttcactagaacagcatttaacggatattcaagctggtaaaagc
cagattttgatcggtactcaaatgctggctaaagggcatcacttcccaaatgtaaccttg
gttgcgattgtcaatgtggatagcagtctattttccaccgatttccgtgcagaagaacgt
cttgctcaactctatttgcaagtggctgggcgtgcaggacgtgctgaaaaacagggggaa
gtggtgttacaaacccattatcccgaacaccctttgctcaaaaccctgttaaacgaaggc
tacttggcattttcaatagaagcattaaaaatgcggaaagtgatgaacttaccgccattt
tcggctcaagtacttattcgagcaacagggcgagataacgataaagtagcagaatttcta
cataatctgaccgcttgtttacagacgatgattcaagataaccaatggcaaggatttcaa
attttaggggctttttctgctccaatggcaaaaaaggcgggacattatcgttggcagtca
attattcagcattcacagcgaacaatgctgcaaaaattgctttcactatttgatgaggtt
aaaacacaattcttacgtaatgatattcgcttaacagtggatattgatccacaagatgta
acataa
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