Bibersteinia trehalosi USDA-ARS-USMARC-188: F542_19660
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Entry
F542_19660 CDS
T03017
Name
(GenBank) Exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
btre
Bibersteinia trehalosi USDA-ARS-USMARC-188
Pathway
btre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F542_19660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btre03400
]
F542_19660
Enzymes [BR:
btre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F542_19660
DNA repair and recombination proteins [BR:
btre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F542_19660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AHG82675
UniProt:
A0A4V7ICB5
LinkDB
All DBs
Position
complement(2162965..2166252)
Genome browser
AA seq
1095 aa
AA seq
DB search
MLKVYYANQLRDHKDLLVGILENDPNPDPFSQETILVQSIGMAQWLQMEIAQKMGISANI
AFPFPTSFVWQQYRTLFPELPKENIFSPSSTVWRFMRLIPKLLSHPSLSPLARYLAEGDQ
LKLYQLATKIADIFDQYLVYRPQWLIHWEQGESQHILNAITQNSSLKIQAHAELENTIQW
QGMLWNALTADIRQDTAEEIFHTSHRAYLQHRYFEKLANLSDLELKKLPKRVFVFGISSL
PPSQLAVLKKLSEYITVHLFFTNPSQEYWGDQQDERMLEKLALKQQISSEEMQEYAKGNP
LLAVWGKQGKEFFNLLEELEPLINEPRLFDDFTGKYSLLANVKRAILYNQPEFDETLNEH
EIPSLQIHACHSKMREVEVLHNRLLAMFEQDPQLSPKDIIVMSPDIDSYAPYINAVFARF
QRSDNRYIPFSLSDQKISHVDPVVASFLNLLSFKEKTFSVEEILDLLNVAAIRTKYQISE
EQLLQLQEWITSVGIRAGLQQDNPSWQNYNSWENGIARLLLGTALKEENNPWQNVLGFDE
SYGLNADLTGNFAHFLENLTAWHMQLQTAHTAKQWQAMLLNLLTQFYSEEHEQIDSVLVL
QHSIKAVMEPILQTEFNEPLATEIILQLFESRFHDTRSSLNFMVGHVNFCTLLPMRAIPF
KVVCLLGMNEGEFPRQQMSNSFDLMQYAHQKGDRARRDDDRYLFLESLLSAQQVFYISYI
GQSLTDNQEKLPSILVSQLLDYLSSQLSDSQVQQYLYRHPMTVFSPNNFIDGAISYDVEW
LQAKHQPQAINDFSEPIARDFVDLPNEIELDDLISYVQDPVKFFFNRQLGIRFEQHEYAP
EPHEVFELSKLDEYQLLNKLVEIKPCDHAQYIENTKLKGKLPHGYFGELATQDMNEKVHM
LQIALADYLGKEKNLLEIDYPQGIRLPNGETYQIRVQGYIQNCFEQQQIVQWRVGRLRDK
DLIRAWLNYLFLIVTQENNVLFRFYFFDKKVQCLRFTTLDKSQAADLIQIYLQDYFANFG
QLTTALTSDLKGYFKTLSEGNENELDLALLEKCLNDSSNPYWYRVVVQTAVPDFNAIHQR
TLRWFELMIRSQEIQ
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaagtctattatgcgaaccaattaagggatcataaggatctgcttgtcggtatt
ttagagaatgatccaaatccagatcctttttcgcaagaaacaatcttggtacaaagtatt
ggtatggcgcagtggctgcaaatggagattgcgcagaaaatgggtatcagtgctaatatc
gcatttcctttcccaactagctttgtttggcagcaatatcgcacactctttccagagcta
cctaaagaaaatattttctcgccttcaagtacagtttggcggtttatgcgtttgatccct
aagctactttctcacccctctctgagtccattggctcgctatttggcagaaggcgatcag
ctaaagctataccagttggccactaaaattgcagatattttcgatcagtatcttgtttat
cgcccacagtggttaattcactgggaacaaggcgaaagtcagcatatcttgaatgcaata
actcaaaattcttctcttaaaatacaagctcatgcagagctggaaaatacgattcaatgg
caaggaatgttgtggaatgccttgactgcagatattcgccaagatacagcagaagagata
tttcatacttcacaccgtgcttatttgcaacatcgctattttgagaaattggctaattta
agcgatctagaactgaaaaaattgccgaaacgggtttttgtttttggcatatcttcttta
ccgccaagtcagcttgccgtattaaaaaagttgagtgaatatattactgtacatctgttt
ttcactaatccgagccaagagtattggggcgatcagcaagatgaacgtatgctagaaaaa
ctcgcgctaaaacagcaaatttcatcagaagaaatgcaggaatatgcgaaaggtaatcca
ttattggctgtttggggtaagcaaggcaaagagttttttaacttactagaagagcttgaa
cctttgattaatgagccacgcctgtttgatgattttacgggcaaatactccttgctggct
aatgttaagcgggcaattttatataatcagcctgaatttgatgagacgctcaatgagcac
gaaataccttctttacaaattcacgcttgtcatagcaaaatgcgtgaagtagaagtgcta
cataatcgcttgttggctatgttcgagcaagatcctcagctatcgccaaaagatatcatt
gtgatgtctccagatattgatagttatgcgccttatatcaatgcggtatttgcacgtttt
caacgcagtgataatcgctatattccgtttagcttatccgatcaaaaaataagccatgtt
gatcctgtcgtggcaagttttttaaatttgctttcatttaaagagaaaacatttagtgta
gaagaaattttagatttgctaaatgtagcggctattcgtacgaaataccaaatcagtgag
gaacagctacttcaactacaagaatggatcacctctgttggcattcgagcaggcttacag
caagataacccctcttggcaaaattacaattcatgggaaaatggcatcgctcgtttgttg
cttggtacagcattaaaagaagaaaataacccatggcaaaatgtacttggttttgatgaa
agttatggattaaatgctgatttaactggcaattttgcacattttttagaaaatctgacc
gcttggcatatgcaattacaaacggcacataccgctaagcagtggcaagcaatgttactt
aatttgctcacgcaattttatagtgaagagcatgagcagatcgacagtgtattagttttg
cagcattcgattaaagcagtgatggagccgatcttacaaacagagttcaatgaacctctg
gctacagagattatcttgcagctgtttgaaagtcgttttcatgatacgcgtagcagcctt
aattttatggttggtcatgtcaatttctgtacgttattaccaatgcgtgctattccattc
aaagtagtttgcttgcttgggatgaatgaaggggaatttccgcgccagcaaatgagcaat
agttttgatttgatgcaatatgctcatcaaaaaggagatcgtgccagacgagatgacgat
cgctacctgtttttggaatcattactctctgcacagcaggtcttctatattagttatatc
ggacaatcactcaccgataatcaagaaaaattgccttctattttagtgtcacagttatta
gattatctctccagccaactgagtgattctcaagttcagcagtacctgtatcggcaccca
atgacagtatttagtccaaataattttattgatggtgcaatttcttatgatgttgaatgg
ttacaggcgaaacatcaaccacaggcaataaatgatttttctgagccgatagcgcgagac
ttcgtggatttaccaaatgaaattgaattggatgatctgatttcttatgttcaagatccg
gttaagtttttctttaataggcagcttgggattcgcttcgaacaacatgaatatgcgcca
gagccacatgaagtgtttgagctttcgaagcttgatgagtatcagcttttgaataagtta
gttgaaattaaaccttgtgaccacgcacaatatattgaaaataccaagctaaaaggtaag
ttaccccatgggtattttggcgaattggcaacgcaggatatgaatgaaaaagtccatatg
ttacaaatcgccttggcggattatttaggtaaagaaaaaaatttacttgaaatcgattat
ccgcaagggattcgattaccaaatggtgaaacttatcaaattcgtgtgcagggttatatt
caaaactgttttgaacagcaacaaattgtacaatggcgagtaggaagactgcgggataaa
gatcttattagggcatggttaaattatttgtttctaattgttacccaagaaaacaatgtg
ctatttcgtttttatttttttgataaaaaagtgcaatgtttacgctttactacgcttgat
aaatcgcaagcggctgacttaattcaaatttacttacaagattattttgcaaattttggc
caattaactaccgctttaaccagcgatttaaaaggctattttaaaactttatcggaaggc
aatgaaaacgagcttgatttagcgctgttggaaaaatgtctaaatgacagcagtaatcct
tattggtatagggttgtagttcaaactgctgtgccagattttaatgctatccatcaacgt
accctacgatggtttgagttgatgatacggtctcaggagattcaatga
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