Bibersteinia trehalosi USDA-ARS-USMARC-188: F542_2400
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Entry
F542_2400 CDS
T03017
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
btre
Bibersteinia trehalosi USDA-ARS-USMARC-188
Pathway
btre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
btre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F542_2400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btre03021
]
F542_2400
03400 DNA repair and recombination proteins [BR:
btre03400
]
F542_2400
Enzymes [BR:
btre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F542_2400
Transcription machinery [BR:
btre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F542_2400
DNA repair and recombination proteins [BR:
btre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F542_2400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
BetaGal_dom3
Motif
Other DBs
NCBI-ProteinID:
AHG80958
UniProt:
A0A4V7I7G4
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All DBs
Position
245153..246142
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPHLVNIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDIILTLTKSGIGPVTAADITADAD
VEIVNPDHVICHLTDKNASISMRIRVQRGRGYVPASARVHSQHEDRPIGRLLVDARFSPV
DRIAYNVEAARVEQRTDLDKLVIEMETNGTLDPEEAIRRAATILAEQLAAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttttaaagccccacttagtgaatattgaacaggttagt
tcaactcacgcaaaagtgaccttagagccgttagaacgtggctttggccacaccttaggt
aacgcacttcgtcgcattttactttcgtctatgcctggttgcgcagttacagaagtagaa
attgatggtgtattacatgaatacagcagcaaagaaggcgtacaagaagatattcttgaa
gtattgttaaaccttaaaggtctagcggtaaaagtgcaaaataaagacgatattattttg
acactaactaaatctgggattggccctgtaactgcagccgatatcaccgccgatgctgat
gttgaaattgtgaacccagatcacgttatctgtcatttaacagataaaaatgcgtctatt
agcatgcgcattcgtgtacagcgtggtcgtggttatgtgccagcatctgctcgtgtacat
tcacaacatgaagatcgtccaatcggtcgcttattagtcgatgctcgtttctcacctgta
gatcgtattgcttacaatgttgaagctgctcgtgttgaacaacgcacagacttagataag
cttgttattgagatggaaactaatggaacattagatccagaagaagccatccgtcgtgct
gcaacgattttagcagagcaactcgctgcattcgttgatttgcgtgatgttcgtcagcca
gaagtgaaagaggaaaaaccggagtttgatccaattcttcttcgtccagtagatgactta
gagctgacagttcgttctgctaactgtttgaaagcagagacaattcactatatcggtgat
ttagtccaacgtacggaagttgaactacttaaaacccctaacttgggtaaaaaatctctt
actgagattaaagatgtactcgcttctcgtggcttatcactgggtatgcgccttgaaaac
tggccgcctgcaagtattgcagaagactag
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