Bibersteinia trehalosi USDA-ARS-USMARC-188: F542_4230
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Entry
F542_4230 CDS
T03017
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
btre
Bibersteinia trehalosi USDA-ARS-USMARC-188
Pathway
btre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
btre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F542_4230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btre03400
]
F542_4230
Enzymes [BR:
btre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
F542_4230
DNA repair and recombination proteins [BR:
btre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F542_4230
Prokaryotic type
F542_4230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHG81141
UniProt:
A0A4V7I824
LinkDB
All DBs
Position
419515..420177
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AA seq
220 aa
AA seq
DB search
MKTWKDAIGEEKQQPYFQQILQFVHHERLSGKMIFPPQSEVFSAFALTEFSDVKVVILGQ
DPYHGLNQAHGLAFSVKPSIAPPPSLVNIYKELAQDVGFQIPSHGYLVEWAKQGVLLLNT
VLTVEQGKAHSHANIGWERFTDKVIEQLNSHREKLVFLLWGSHAQKKGQFIDRHRHHVLT
APHPSPLSAHRGFLGCRHFSKANAYLSSQGIREINWQLPL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacttggaaagacgccattggtgaagaaaaacagcaaccctactttcaacagatc
ttgcaatttgtacatcatgaacgactctcgggaaaaatgatttttccgccgcagagtgaa
gtctttagcgcctttgcgctgactgaattttcagatgtcaaagtggttattttagggcaa
gatccttatcatggattgaatcaagcacatggtttagcattttctgttaagcccagcata
gcgccccccccgtcattagtgaatatctataaagaattagcacaagatgttggttttcaa
ataccgtctcacggttatttagtcgaatgggcaaagcaaggagtattgctgctcaatact
gttttaaccgtagagcaggggaaagcgcattctcacgcaaacattggttgggagcgtttt
actgataaagtgattgagcaacttaattcgcatcgggaaaagttagtcttcctactttgg
ggaagccacgctcagaaaaaggggcaatttattgatcgtcatcgtcatcatgtattaaca
gccccacatccatcaccgctttctgcacaccgtggttttttggggtgtcgccatttttct
aaagcgaacgcatatttgagctcgcagggaattcgcgagatcaattggcaacttccatta
taa
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