Bibersteinia trehalosi USDA-ARS-USMARC-188: F542_5870
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Entry
F542_5870 CDS
T03017
Name
(GenBank) endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
btre
Bibersteinia trehalosi USDA-ARS-USMARC-188
Pathway
btre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
btre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F542_5870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btre03400
]
F542_5870
Enzymes [BR:
btre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
F542_5870
DNA repair and recombination proteins [BR:
btre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
F542_5870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AHG81305
UniProt:
A0A4V7I8G0
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All DBs
Position
593032..593871
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AA seq
279 aa
AA seq
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MKYIGAHVSASGGVENAVLRSVEIGANAFALFTKNQRQWKAPALKADSIEKFKLFCAVHH
FSADQILPHDRYLINLGNPEAETLEKSRTAFIDEMQRCDQLGLKLLNFHPGAHLNKISEK
ACLSRIAESLNIAIEAVPNVVAVIENTAGQGSNLGYRFEHLAEIIEQVEDKSRVGVCLDT
CHLFSAGYDISSYAKSEQVFTEFANIVGFNYLRGMHLNGSKTPLGSRVDRHDTLRKGTIG
TEVFQFIMQSVDFDGIPMILETIEPEHWADEIQFLRAMV
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatattggtgcccatgtgagtgcttctggtggcgtagaaaatgcggtattacgt
tcggtagagattggggcaaatgcgtttgcactattcactaaaaatcaacgccagtggaaa
gcacctgcattaaaggcggatagtattgaaaaatttaaacttttttgtgctgtacaccat
ttcagcgcggatcagattttgccgcacgatagatatttgattaatttaggcaatcctgag
gcagagacgctagaaaaatcgcgtacagcttttattgatgagatgcaacgatgtgatcaa
ttaggtttaaaattgcttaattttcacccaggagcacatttgaataaaatttcagaaaag
gcgtgtttaagccgtattgctgagtcgttaaatatagcgattgaagccgtacctaatgtc
gttgcagtaattgaaaatacagcagggcaaggctcaaatttgggctaccgatttgagcat
ttggctgaaattattgaacaagtggaagataaaagtcgtgtaggtgtttgcttagatact
tgtcatcttttttcggcaggctacgatattagtagctatgcgaaaagtgagcaagttttt
actgaatttgccaatattgttggatttaactatttacgtggtatgcatctcaatggctct
aaaacaccacttggaagccgagtagatagacacgatacgctacgtaagggcacaattggt
actgaagtcttccaatttatcatgcaatcagtcgattttgatggtattccaatgatttta
gaaaccattgaaccagaacattgggctgatgaaattcagtttttgcgagctatggtataa
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