Bibersteinia trehalosi USDA-ARS-USMARC-188: F542_6960
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Entry
F542_6960 CDS
T03017
Name
(GenBank) Ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
btre
Bibersteinia trehalosi USDA-ARS-USMARC-188
Brite
KEGG Orthology (KO) [BR:
btre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
btre03009
]
F542_6960
Enzymes [BR:
btre01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
F542_6960
Ribosome biogenesis [BR:
btre03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
F542_6960
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
CDC48_2
Motif
Other DBs
NCBI-ProteinID:
AHG81414
LinkDB
All DBs
Position
complement(710088..710864)
Genome browser
AA seq
258 aa
AA seq
DB search
MQNFCKIDRLTFTMRIPRIYHPTPLANQSHCILSDDAANHVGRVLRMGEGAELILFDGSN
HIFNATIQTISKKYIEVIIHHSQFDDRESPLPIHLGQVISRGDRMEFTIQKSVELGVTTI
TPLWSERCGVKLDSERQDKKLQQWQKIAISACEQCGRNVVPEIRPIMKLSDWCKEQDAML
KLNLHPRAKYTLKSLPNMPKEGVRLLIGSEGGLSAEEIIMTEQQGFTEVLLGKRILRTET
ASLATISALQTLYGDLCE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
ttgcagaatttttgcaaaatcgaccgcttaacattcactatgagaataccaagaatttat
catccaactcccctcgccaaccaaagccactgtattttaagcgatgatgctgccaaccat
gttgggcgcgtcttacgtatgggtgaaggcgcagagttaattctatttgatggctcaaac
cacatttttaatgccactattcaaactatcagcaaaaaatacattgaagttatcatccac
cattcacagtttgatgatcgtgaaagtccactaccaatccatctagggcaagtgatttct
cgtggcgatcgtatggaatttaccattcaaaaatcggttgaactcggtgtaacaactatc
acaccattatggtctgagcgctgtggcgtaaaacttgatagtgagcgccaagataaaaaa
ttacaacagtggcagaaaattgctatttcagcttgtgaacaatgcggacgcaatgttgta
ccagaaattcgcccaatcatgaaactcagtgattggtgtaaagagcaagatgcgatgcta
aaattaaatcttcatccgcgcgctaaatataccttgaaatccttaccaaatatgccaaaa
gaaggcgtgcgtttacttattggctcagagggcggattatccgcagaagaaatcatcatg
acagaacaacaaggctttaccgaagtgctccttggtaagcgaatattacgtacagaaacg
gcttcgctcgcaacaattagcgctttgcaaacattatacggagatctctgcgaatga
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integrated database retrieval system
