Bibersteinia trehalosi USDA-ARS-USMARC-188: F542_8760
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Entry
F542_8760 CDS
T03017
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
btre
Bibersteinia trehalosi USDA-ARS-USMARC-188
Pathway
btre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F542_8760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btre03019
]
F542_8760
03016 Transfer RNA biogenesis [BR:
btre03016
]
F542_8760
Enzymes [BR:
btre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
F542_8760
Messenger RNA biogenesis [BR:
btre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F542_8760
Transfer RNA biogenesis [BR:
btre03016
]
Prokaryotic type
tRNA degradation factors
F542_8760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
aRib
S1_2
UPF0181
KH_SLS1_2
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AHG81594
UniProt:
A0A4V7I986
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All DBs
Position
895881..898019
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AA seq
712 aa
AA seq
DB search
MLNPIVRQFKYGQHTVTLETGAIGRQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLT
VDYQERTYAAGRIPGGFFKREGRPSEGETLVARLIDRPVRPLFPEGFFNEIQVIATVMSV
NPQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQLVLNPTTSEQKISRLDLVVA
GTDKAVLMVESEADILTEEQMLAAVVFGHEQQQVVIENIKEFVKEAGKPRWDWVAPEPNT
DLINKVKALAETRLGDAYRIVEKQVRYEQIDAIKAETIAAIIGEDETISEGAIVDIFTAL
ESQIVRSRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSALFTRGETQALAVATLGTER
DAQIIDELTGEKSDRFLFHYNFPPFSVGETGRIGSPKRREIGHGRLAKRGVLAVMPTAEE
FPYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDEKFVVLSD
ILGDEDHLGDMDFKVAGTRTGVTALQMDIKIEGITPEIMRIALNQAKGARMHILGVMEQA
IPAPRADISDYAPRIHTMKIDPKKIKDVIGKGGATIRALTEETNTSIDIDDDGTVKIAAT
DGNAAKAVMARIEEIVAEVEVNQIYNGKVTRVVDFGAFVSILGGKEGLVHISQITDTRVE
RVSDYLSVGQEVQVKVVEIDRQGRIRLTMKDLNAAAETETVEQENSQSDIVE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatcctattgtaagacaatttaaatacggtcagcataccgtaaccttggaaacg
ggggctattggtcgtcaagcaactgctgccgtcatggcaagtatggacgacaccacggtt
ttcgtgactgtggttgcgaaaaaagacgtaaaagaaggtcaagatttctttcctttaacg
gttgattatcaagaacgtacctatgcagcaggtcgtatccctggtggtttctttaaacgt
gaaggcagaccatcagaaggtgaaaccttagttgctcgtttgattgaccgtcctgttcgc
ccacttttccctgaaggtttctttaacgaaatccaagtcatcgcaaccgtaatgtcagtg
aatccacaaattagcccagatttagtggcaatgatcggtgcatcggcagcgctttcttta
tcaggtgtaccatttaatggcccaatcggtgcagctcgtgttggttttattaacgatcaa
ttagtattaaacccaacgactagcgaacaaaaaatcagccgcttagatttagtggttgct
ggtacagataaagccgtattgatggtggaatcagaagcagatattttaactgaagaacaa
atgcttgcagcggtagtgtttggtcatgaacagcaacaagtggtgattgaaaatatcaaa
gagttcgtgaaagaagcaggcaaaccacgttgggattgggttgcaccagaaccaaatacc
gatttaattaataaagtgaaagcattagctgaaactcgtttaggtgatgcgtaccgtatc
gttgaaaagcaagtgcgttatgaacaaattgatgcaattaaagcagaaacaattgcagca
atcattggcgaagatgaaaccatttcagaaggcgctatcgttgatattttcacggcatta
gaaagccaaatcgtgcgtagccgtattattgcgggcgaaccacgcattgacggtcgtacg
gtagataccgtgcgtgccttagatatttgtactggcgtattaccacgcactcacggttct
gcacttttcactcgtggcgaaacccaagcattagctgtagcaacattaggtacagaacgt
gatgcacaaatcattgatgaattaaccggcgaaaaatccgatcgtttcttattccactac
aacttccctccattctcagtcggtgaaaccggccgtatcggctcaccaaaacgccgtgaa
attggtcatggtcgtttagcaaaacgtggtgtgttagcggtgatgccaactgcggaagag
ttcccgtatgtagtgcgagtggtgtctgaaatcaccgaatctaacggttcttcttcaatg
gcatctgtatgtggtgcttctcttgcgttaatggatgcaggtgtgccaatcaaagcagcg
gttgcgggtatcgcaatgggactcgtgaaagaagacgagaaattcgtagtactttccgat
attttaggtgatgaagaccacttaggcgatatggactttaaagtggcaggaactcgcact
ggtgtaacagcactgcaaatggatattaaaattgaagggatcacccctgaaattatgcgt
attgctttaaaccaagcgaaaggtgcaagaatgcacattttaggtgtgatggaacaagcc
attccggcacctcgtgcagatatttctgactatgcgccacgcattcacaccatgaagatc
gatccaaagaaaatcaaagatgtgattggtaaaggcggtgcaacaattcgtgctttaacc
gaagagaccaatacttctattgacattgatgatgacggtaccgtgaaaattgcggcaact
gacggcaatgcagcgaaagcggtaatggctcgcattgaagagattgttgccgaagtggaa
gtaaaccaaatctacaacggtaaagtgacccgtgtggtggacttcggtgcattcgtttca
attttaggtggcaaagaaggcttggtacacatttcgcaaatcacagatactcgtgtagaa
cgtgtgtctgattacctcagtgtcggtcaagaggtgcaagtgaaagtagtggaaattgac
cgtcaaggcagaatccgtttaacgatgaaagatttaaatgccgcagcagaaacagaaact
gttgagcaagaaaattctcaatcagatatcgttgaataa
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