Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_10080
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Entry
F543_10080 CDS
T03018
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Pathway
btrh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F543_10080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btrh03019
]
F543_10080
03016 Transfer RNA biogenesis [BR:
btrh03016
]
F543_10080
Enzymes [BR:
btrh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
F543_10080
Messenger RNA biogenesis [BR:
btrh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F543_10080
Transfer RNA biogenesis [BR:
btrh03016
]
Prokaryotic type
tRNA degradation factors
F543_10080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
S1_RRP5
KH_2
aRib
S1_2
KH_SLS1_2
KH-I_KHDC4-BBP
OB_RRP5_4th
UPF0181
Motif
Other DBs
NCBI-ProteinID:
AHG83872
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All DBs
Position
976960..978567
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AA seq
535 aa
AA seq
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MVAGTDKAVLMVESEADILTEEQMLAAVVFGHEQQQVVIENIKEFVKEAGKPRWDWVAPE
PNTDLINKVKALAETRLGDAYRIVEKQVRYEQIDAIKAETIAAIIGEDETISEGAIVDIF
TALESQIVRSRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSALFTRGETQALAVATLG
TERDAQIIDELTGEKSDRFLFHYNFPPFSVGETGRIGSPKRREIGHGRLAKRGVLAVMPT
AEEFPYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDEKFVV
LSDILGDEDHLGDMDFKVAGTRTGVTALQMDIKIEGITPEIMRIALNQAKGARMHILGVM
EQAIPAPRADISDYAPRIHTMKIDPKKIKDVIGKGGATIRALTEETNTSIDIDDDGTVKI
AATDGNAAKAVMARIEEIVAEVEVNQIYNGKVTRVVDFGAFVSILGGKEGLVHISQITDT
RVERVSDYLSVGQEVQVKVVEIDRQGRIRLTMKDLNAAAETETVEQENSQSDIVE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
gtggttgctggtacagataaagccgtattgatggtggaatcagaagcagatattttaact
gaagaacaaatgcttgcagcggtagtgtttggtcatgaacagcaacaagtggtgattgaa
aatatcaaagagttcgtgaaagaagcaggcaaaccacgttgggattgggttgcaccagaa
ccaaataccgatttaattaataaagtgaaagcattagctgaaactcgtttaggtgatgcg
taccgtatcgttgaaaagcaagtgcgttatgaacaaattgatgcaattaaagcagaaaca
attgcagcaatcattggcgaagatgaaaccatttcagaaggcgctatcgttgatattttc
acggcattagaaagccaaatcgtgcgtagccgtattattgcgggcgaaccacgcattgac
ggtcgtacggtagataccgtgcgtgccttagatatttgtactggcgtattaccacgcact
cacggttctgcacttttcactcgtggcgaaacccaagcattagctgtagcaacattaggt
acagaacgtgatgcacaaatcattgatgaattaaccggcgaaaaatccgatcgtttctta
ttccactacaacttccctccattctcagtcggtgaaaccggccgtatcggctcaccaaaa
cgccgtgaaattggtcatggtcgtttagcaaaacgtggtgtgttagcggtgatgccaact
gcggaagagttcccgtatgtagtgcgagtggtgtctgaaatcaccgaatctaacggttct
tcttcaatggcatctgtatgtggtgcttctcttgcgttaatggatgcaggtgtgccaatc
aaagcagcggttgcgggtatcgcaatgggactcgtgaaagaagacgagaaattcgtagta
ctttccgatattttaggtgatgaagaccacttaggcgatatggactttaaagtggcagga
actcgcactggtgtaacagcactgcaaatggatattaaaattgaagggatcacccctgaa
attatgcgtattgccttaaaccaagccaaaggtgcaagaatgcacattttaggcgtgatg
gaacaagccattccggcacctcgtgcagatatttctgactatgcgccacgcattcacacc
atgaagatcgatccgaagaaaatcaaagatgtgattggtaaaggcggtgcgacaattcgt
gctttaaccgaagagaccaatacttctattgacattgatgatgatggtacagtgaaaatt
gcggcaactgacggtaatgcagcgaaagcggtaatggctcgcattgaagagatcgttgcc
gaagtggaagtaaaccaaatctataacggtaaagtaacccgtgtggtggacttcggtgca
ttcgtttcaattttaggtggcaaagaaggcttggtacacatttcgcaaatcacagatact
cgtgtagaacgtgtgtctgattacctcagtgtcggtcaagaggtgcaagtgaaagtggtg
gaaattgaccgtcaaggcagaatccgtttaacgatgaaagatttaaatgccgcagcagaa
acagaaactgttgagcaagaaaattctcaatcagatatcgttgaataa
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