KEGG   Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_10080
Entry
F543_10080        CDS       T03018                                 
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
btrh  Bibersteinia trehalosi USDA-ARS-USMARC-189
Pathway
btrh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:btrh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    F543_10080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:btrh03019]
    F543_10080
   03016 Transfer RNA biogenesis [BR:btrh03016]
    F543_10080
Enzymes [BR:btrh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     F543_10080
Messenger RNA biogenesis [BR:btrh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     F543_10080
Transfer RNA biogenesis [BR:btrh03016]
 Prokaryotic type
  tRNA degradation factors
   F543_10080
SSDB
Motif
Pfam: RNase_PH PNPase S1 KH_1 RNase_PH_C S1_RRP5 KH_2 aRib S1_2 KH_SLS1_2 KH-I_KHDC4-BBP OB_RRP5_4th UPF0181
Other DBs
NCBI-ProteinID: AHG83872
LinkDB
Position
976960..978567
AA seq 535 aa
MVAGTDKAVLMVESEADILTEEQMLAAVVFGHEQQQVVIENIKEFVKEAGKPRWDWVAPE
PNTDLINKVKALAETRLGDAYRIVEKQVRYEQIDAIKAETIAAIIGEDETISEGAIVDIF
TALESQIVRSRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSALFTRGETQALAVATLG
TERDAQIIDELTGEKSDRFLFHYNFPPFSVGETGRIGSPKRREIGHGRLAKRGVLAVMPT
AEEFPYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDEKFVV
LSDILGDEDHLGDMDFKVAGTRTGVTALQMDIKIEGITPEIMRIALNQAKGARMHILGVM
EQAIPAPRADISDYAPRIHTMKIDPKKIKDVIGKGGATIRALTEETNTSIDIDDDGTVKI
AATDGNAAKAVMARIEEIVAEVEVNQIYNGKVTRVVDFGAFVSILGGKEGLVHISQITDT
RVERVSDYLSVGQEVQVKVVEIDRQGRIRLTMKDLNAAAETETVEQENSQSDIVE
NT seq 1608 nt   +upstreamnt  +downstreamnt
gtggttgctggtacagataaagccgtattgatggtggaatcagaagcagatattttaact
gaagaacaaatgcttgcagcggtagtgtttggtcatgaacagcaacaagtggtgattgaa
aatatcaaagagttcgtgaaagaagcaggcaaaccacgttgggattgggttgcaccagaa
ccaaataccgatttaattaataaagtgaaagcattagctgaaactcgtttaggtgatgcg
taccgtatcgttgaaaagcaagtgcgttatgaacaaattgatgcaattaaagcagaaaca
attgcagcaatcattggcgaagatgaaaccatttcagaaggcgctatcgttgatattttc
acggcattagaaagccaaatcgtgcgtagccgtattattgcgggcgaaccacgcattgac
ggtcgtacggtagataccgtgcgtgccttagatatttgtactggcgtattaccacgcact
cacggttctgcacttttcactcgtggcgaaacccaagcattagctgtagcaacattaggt
acagaacgtgatgcacaaatcattgatgaattaaccggcgaaaaatccgatcgtttctta
ttccactacaacttccctccattctcagtcggtgaaaccggccgtatcggctcaccaaaa
cgccgtgaaattggtcatggtcgtttagcaaaacgtggtgtgttagcggtgatgccaact
gcggaagagttcccgtatgtagtgcgagtggtgtctgaaatcaccgaatctaacggttct
tcttcaatggcatctgtatgtggtgcttctcttgcgttaatggatgcaggtgtgccaatc
aaagcagcggttgcgggtatcgcaatgggactcgtgaaagaagacgagaaattcgtagta
ctttccgatattttaggtgatgaagaccacttaggcgatatggactttaaagtggcagga
actcgcactggtgtaacagcactgcaaatggatattaaaattgaagggatcacccctgaa
attatgcgtattgccttaaaccaagccaaaggtgcaagaatgcacattttaggcgtgatg
gaacaagccattccggcacctcgtgcagatatttctgactatgcgccacgcattcacacc
atgaagatcgatccgaagaaaatcaaagatgtgattggtaaaggcggtgcgacaattcgt
gctttaaccgaagagaccaatacttctattgacattgatgatgatggtacagtgaaaatt
gcggcaactgacggtaatgcagcgaaagcggtaatggctcgcattgaagagatcgttgcc
gaagtggaagtaaaccaaatctataacggtaaagtaacccgtgtggtggacttcggtgca
ttcgtttcaattttaggtggcaaagaaggcttggtacacatttcgcaaatcacagatact
cgtgtagaacgtgtgtctgattacctcagtgtcggtcaagaggtgcaagtgaaagtggtg
gaaattgaccgtcaaggcagaatccgtttaacgatgaaagatttaaatgccgcagcagaa
acagaaactgttgagcaagaaaattctcaatcagatatcgttgaataa

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