Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_11020
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Entry
F543_11020 CDS
T03018
Name
(GenBank) Pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
btrh03009
]
F543_11020
03016 Transfer RNA biogenesis [BR:
btrh03016
]
F543_11020
Enzymes [BR:
btrh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
F543_11020
5.4.99.29 23S rRNA pseudouridine746 synthase
F543_11020
Ribosome biogenesis [BR:
btrh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
F543_11020
Transfer RNA biogenesis [BR:
btrh03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
F543_11020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AHG83966
LinkDB
All DBs
Position
1077525..1078169
Genome browser
AA seq
214 aa
AA seq
DB search
MCNSQFPVIFQHSDFVIINKPAGISVHRDEQAIGLCENLAKQLNVPQVWLVHRLDKVTSG
LLIFALNKEAAAYFYQLFEHQQIQKTYWALATDKPKKKQGTIIGDMQKSRNGAWKLCHSK
ENPAITRFCSRSLEPNLRHFILQPKTGKTHQLRVAMKSLGSPILGDTLYAGTVSDRVYLH
AYQLDFLYQGEQITVSTLPDMASGQFWQKICKEG
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaattctcaatttcctgtcattttccaacattctgattttgtgataattaacaaa
cctgcgggtatcagtgtgcatcgtgatgagcaagcgataggattatgcgaaaatcttgca
aagcagcttaatgtgccacaagtctggcttgttcatcgtttagataaagttacttctggc
ttgttgatttttgctttaaataaagaagctgccgcttatttttatcagctgtttgaacat
caacagattcagaagacttattgggcattagcaacggataagccaaagaaaaaacaaggc
acaattattggtgacatgcaaaagagccgtaatggggcttggaaattatgccatagtaaa
gaaaaccccgcgatcactcgcttttgttcacggagccttgagccgaatcttcgccatttt
attttacaacctaaaacaggcaaaacccaccagctacgggtagcaatgaaaagccttggt
agtccaattctaggcgatacgctatatgcaggaacggtttcggatcgcgtttatctgcat
gcctatcaattagattttctatatcaaggcgaacagattactgtttctacattgcccgat
atggcaagcggtcaattttggcaaaaaatctgcaaagagggatga
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