Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_11180
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Entry
F543_11180 CDS
T03018
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btrh03021
]
F543_11180
03009 Ribosome biogenesis [BR:
btrh03009
]
F543_11180
Transcription machinery [BR:
btrh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
F543_11180
Ribosome biogenesis [BR:
btrh03009
]
Prokaryotic type
rRNA transcription factors
F543_11180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
KH_KhpA-B
LRR_EndoS
DUF2711
Motif
Other DBs
NCBI-ProteinID:
AHG83982
LinkDB
All DBs
Position
1098695..1100227
Genome browser
AA seq
510 aa
AA seq
DB search
MSKEILLAAEAVSNEKLLPKDAIFEALETALAISTKKKAANEREDVKTAKGIDIDVRVVI
DRKTGEFTTFRRWLVVENVHNQTREISLEAAQYEDPSIQLGDFIEDEIESIAFDRITMQT
ARQVISTKIREAERNKVIDEFRSEEGNIVLGTVKKVSRDSIILELPGKKDATIKAEAIIV
REDMLPRENFRPGDRIRGVLYAIKPESKGPQLFITRAKPIMLQKLFELEVPEIGEGVIEI
KGAARDPGSRAKLAVKTHDKRIDPVGACVGMRGARVQAISNELGGERVDIVLWDDNPAQF
VINAMAPADVSSIVVDEDNHSMDIAVEPSALAQAIGRNGQNVRLATQLTGWTLNVMTTTD
LDQKHQEEDNKVINLFVSSLEIDEEFAQILIEEGFSSLEELAYVPMAELTAIDGLEDEDL
VEELQTRAKNVLTQQLLAEEEALKQAHIEERLLNLEGMERHIALKLAEKQITTLEALAEQ
GVDDLADIEELTAEQAGELIMAARQICWFS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagagattttacttgccgctgaagcggtatccaatgaaaaactgctaccaaaa
gatgcaattttcgaagccttagaaacggcattagcaatttcaaccaagaaaaaagcagcc
aatgagcgtgaagatgtaaaaacagcgaaaggtattgatattgacgtgcgagtcgttatt
gatcgtaaaacaggtgaatttaccacttttcgtcgttggctagtggtagaaaatgttcac
aatcaaacacgtgaaattagcttggaagccgcacagtatgaagatccaagcattcagtta
ggtgattttattgaagatgaaattgaatcgatcgccttcgatcgtatcactatgcaaacc
gctcgtcaggtgattagtactaaaatccgtgaggcagagcgtaataaagtcattgatgaa
ttccgtagtgaagaaggtaatattgtgcttggtacggtaaaaaaagtaagccgtgatagc
attattttagaattgccgggtaaaaaagatgctacgatcaaagcggaagctatcattgtg
cgtgaagatatgcttccgcgcgaaaacttccgcccaggagaccgtattcgtggggtgttg
tatgcgattaagcctgagtcaaaagggccacagcttttcatcactcgtgcaaaaccgatc
atgttacaaaaattatttgagttagaagtaccagaaattggcgaaggcgtgattgaaata
aaaggtgctgctcgtgatccaggaagccgcgctaaactggcagtgaaaacccatgataaa
cgtattgatcctgttggtgcttgcgtaggtatgcgcggagcacgagtgcaagcgatcagc
aatgaattaggtggtgagcgagttgatatcgtactttgggatgataatcctgcacaattc
gtaatcaatgcgatggctccagcagatgtaagttctattgtggtagatgaagataatcat
tctatggatattgcagttgagccatcagcgttagcccaagcaatcggtcgtaatggtcaa
aacgtacgtcttgcaactcaattaactggttggacattaaatgtgatgacgaccactgat
ttagatcagaagcatcaagaagaagacaataaagtgatcaatctttttgtttcgagctta
gagatcgatgaagaatttgcgcaaatcttaattgaagaaggctttagtagtctagaagag
ttagcttatgttccaatggctgaacttactgcgattgatggtttagaagatgaagatttg
gtggaagagttacaaacccgcgcgaaaaatgtattaacgcaacaactgttagccgaagaa
gaagcgttaaaacaggcgcatattgaggagcgcttgctcaatttagaggggatggaacgc
cacatcgcgctaaaacttgcagaaaaacagattaccacccttgaagcattggcagaacaa
ggtgttgatgatcttgcagacattgaagaattaacagctgaacaagcgggcgaattaatt
atggccgcacgtcaaatttgctggttcagttaa
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