Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_12220
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Entry
F543_12220 CDS
T03018
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btrh03032
]
F543_12220
03036 Chromosome and associated proteins [BR:
btrh03036
]
F543_12220
03400 DNA repair and recombination proteins [BR:
btrh03400
]
F543_12220
DNA replication proteins [BR:
btrh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
F543_12220
Chromosome and associated proteins [BR:
btrh03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
F543_12220
DNA repair and recombination proteins [BR:
btrh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
F543_12220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
THDPS_N_2
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AHG84086
LinkDB
All DBs
Position
1229752..1230033
Genome browser
AA seq
93 aa
AA seq
DB search
MTKSELIENLVAKNPSIQSKSVDECVKEILEQMIAALEKGSRIEVRGFGSFSLHYRQSRV
GRNPKTGDSVKLSSKYVPHFKAGKELKERVDLS
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatcagaattgattgagaatttagtagctaaaaatccttctattcaatccaaa
tctgttgatgaatgcgttaaagaaattttagagcaaatgattgctgctctagaaaagggt
tctcgcattgaagtaagaggatttggtagcttttcactgcactatcgtcagtctcgagtg
ggacgtaaccctaaaacaggtgatagtgtaaaattatcttcaaaatatgttcctcacttt
aaagcagggaaagaacttaaagaacgtgtagatttgtcgtaa
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