Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_12630
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Entry
F543_12630 CDS
T03018
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
btrh03016
]
F543_12630
Enzymes [BR:
btrh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
F543_12630
Transfer RNA biogenesis [BR:
btrh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
F543_12630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF2274
PilZ
Motif
Other DBs
NCBI-ProteinID:
AHG84127
LinkDB
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Position
1274697..1276673
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AA seq
658 aa
AA seq
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MFQNNPLLAQLKQQIEASKEYVEGVVKASDKAYGFLECDKESFFIPPPEMKKVMHGDRVK
AVVKREGDKAQVEIDSLIEPMLERFIAQVKFNKDGKLQLAVDHPSINNRIGANVNKKVNQ
ELKENDWVVAQLRTHPLRDDRFFFAQVTQFICEANDNYAPWWVTLARHEQPREPVKGEDS
YELHDELDREDLTHLYFTTIDSPSTQDMDDALYIEPTDNGWKLVVAIADPTAYIPENSRL
EKDARQRCFTNYLPGFNIPMLPRELSDELCSLVPNEKRPALVAFIETDKAGEIVGETRFV
SAWVKSHDRLAYNDVSDFIEQLENSWQPESNETRQQIEWLHQFTLARIEWRKQNALLFKE
SGDYSFELNEDGSVRDIHVDFRRIANQMIEESMILANICCAKYLEQYAGTGVFNTHLGFD
SKNLEPARKFLLETLANDENRETLSERYSPERLTTLEGYCEMRRDIDAYSEQTQTNFLEL
RLRRYLTFAEFKANAAPHLGLGISHYATWTSPIRKYGDMVNHRIIKQILAQKTPLAVEES
VLVRLQEARKQNRLVERDIADWLYARYLEPMVEKNVEFEGEIHDVSRGGLRVRVTENGAS
IFVPCSTLHSNKEEILFTPEELALYIKGAKAYQIGQTVKLRLTEVRLETRSIVGELLL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaaataatccccttttagcccagctaaaacaacaaattgaagcgtccaaagag
tatgtggaaggcgtagtaaaagcatctgacaaagcttatggctttttagagtgcgataaa
gaaagcttttttatcccgcctccagaaatgaaaaaggtcatgcatggcgatagagtaaaa
gctgtcgttaagcgtgaaggcgataaagcacaggttgaaattgacagcctgattgagcct
atgcttgagcgttttattgcacaggtgaaatttaacaaagacggtaaattacaacttgcc
gtagatcatcctagcattaacaatcgcattggggcgaatgtgaataaaaaagtcaaccaa
gaactcaaagaaaatgattgggtggtggcacaacttcgcacgcaccctctgcgtgatgat
cgttttttctttgcacaggttacgcaatttatttgtgaagcaaatgataactatgcccct
tggtgggtaacacttgctcgccacgaacagcctcgtgaaccagtaaaaggggaagatagt
tatgaattgcacgatgaattagatcgtgaggatttaacacatctttatttcacgactatt
gatagcccaagtacgcaggatatggacgatgcgctctatattgagccaaccgataacggc
tggaaattagtggtcgccattgccgatccaacagcctatattcctgaaaattctcgtttg
gaaaaagatgctcgccaacgttgttttacgaattacttgccgggatttaacattccaatg
ttgcctcgtgagctttcagatgaactttgttcgcttgtaccaaatgaaaaacgccctgca
ttagtggctttcattgaaacggataaagctggtgaaattgtcggagaaactcgttttgtg
tctgcgtgggtaaaatcgcatgaccgtttagcctataacgatgtatcagattttattgag
cagctagaaaatagttggcagccagaaagtaatgaaactcgtcagcaaattgagtggttg
catcaatttacccttgctcgtattgaatggcgtaaacaaaatgccttacttttcaaagaa
agtggtgattattcgtttgaattaaatgaagacggttccgtgcgtgatattcacgtagat
ttccgccgtattgcgaatcaaatgattgaagaatcaatgattcttgccaatatttgctgt
gcgaaatatctagaacaatacgcaggaacaggcgtgtttaatactcatcttggttttgat
agtaaaaatttagagcctgctcgcaaattcttattagagacactggcaaatgatgaaaat
cgtgaaacattaagtgaacgttattccccagagcgtttaactacacttgaaggttattgc
gaaatgcgtcgtgacatagatgcgtatagcgaacagacgcaaaccaatttcttggaattg
cgtttgcgtcgctatttaacttttgcagagtttaaagcgaatgcggcaccacatttaggc
ttagggatttcacattatgcgacttggacatcaccaattcgtaaatatggcgatatggta
aatcaccgcattattaagcaaattttggctcaaaaaacaccgcttgcggtagaagagagc
gtactcgttcgtttacaagaagcacgtaaacagaatcgtctcgttgagcgtgatattgcc
gactggctttatgctcgctatcttgaaccgatggtagagaaaaatgtagagtttgagggc
gaaattcacgacgtctctcgtggcggcttgcgtgtgcgtgtgactgaaaacggtgcatcc
atttttgtgccatgctcgacacttcattcaaataaagaagaaatcttgtttacgcctgaa
gaattagcactttatattaaaggtgctaaagcttatcaaattgggcaaacagttaagctg
agattaaccgaagtacgattggaaactcgcagtattgtcggcgaattattgctttag
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