Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_12890
Help
Entry
F543_12890 CDS
T03018
Name
(GenBank) Lytic transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
btrh01011
]
F543_12890
Enzymes [BR:
btrh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
F543_12890
Peptidoglycan biosynthesis and degradation proteins [BR:
btrh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
F543_12890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLT_2
SLT_4
Glucosaminidase
Motif
Other DBs
NCBI-ProteinID:
AHG84153
UniProt:
A0ABM7D4W1
LinkDB
All DBs
Position
complement(1302201..1303292)
Genome browser
AA seq
363 aa
AA seq
DB search
MYKKLRNVALISAATLLAVACSSDKSQIKPLALDAQYAKPRTFQNFTDYVVFLKQKAAGQ
GVSAKVLNSQFNINYVARAVELDQEQAARRRDPNTPPPAPNPNGVTNYLNKVLTQAKVDA
AVDRWWQYQPHLHKASQKYGVPKEYLMALWGMESSFGRYQGNFDVLSVLATLAFDGRREA
LFTQEFVNAMKMLQNGTIYRAEMKGSWAGAMGQTQFMPTSYLKYAADGDGDGKKDIWRNQ
YDAFASIASYLATVGWEQNLPWGVEVKLAQPMDLSFAGIEKHQAKSLSEWQSMGLYLAYP
SEQENRKLNALRSAKLWLVRPDKEVGRAFLVSNNYRTIMDWNRSNNFAISIGKFADRIEQ
AVR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaaattacgtaatgttgcattaataagtgctgcaactttattggcagttgct
tgttctagcgataagtcgcagattaagccattagcgctggatgcgcaatatgctaaaccg
cgcacattccaaaattttacggattatgttgtttttttaaaacaaaaggccgctggacaa
ggcgtatctgccaaggttttaaactctcagtttaatattaattatgtggctcgggctgtg
gagttagatcaggaacaagctgcgcgtcgtcgtgatccaaatacccctccgcctgcacct
aatcctaacggtgtaaccaattatttaaataaagttttaacccaagctaaggtggatgct
gcggtagatcgctggtggcaatatcaacctcatctacataaagcaagccaaaaatatggt
gtccctaaagaatatttaatggctctttggggaatggaaagtagctttggacgctatcaa
ggtaattttgatgtgctctcagtgctggcaactttagcttttgacggaagacgagaggcg
ttgtttactcaagaatttgtcaatgcgatgaaaatgttacaaaacggaacgatttatcgt
gctgaaatgaaaggatcgtgggctggtgcaatgggacaaactcaatttatgccaacctca
tatttgaaatatgcagcagatggtgatggcgatggcaaaaaagacatttggcgaaaccag
tatgatgcttttgcttcaatagcctcttatcttgctacagtaggatgggaacaaaatctg
ccttggggggttgaagtgaaattagcacagccaatggatctctcatttgctggtattgaa
aagcatcaggcaaaatcactttctgaatggcaatctatggggctttatttagcttatcct
agcgagcaggaaaatcgtaaattaaatgcgttacgcagtgcaaaattatggttagtgcgt
ccagataaagaagtagggcgtgcgtttttggtctcaaataactatcgcacgattatggac
tggaaccgctcgaataattttgctattagcattggtaaatttgcagatcggattgaacag
gcagtaaggtaa
DBGET
integrated database retrieval system
