Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_12900
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Entry
F543_12900 CDS
T03018
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
btrh03016
]
F543_12900
Enzymes [BR:
btrh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
F543_12900
Transfer RNA biogenesis [BR:
btrh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F543_12900
Prokaryotic type
F543_12900
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AHG84154
UniProt:
A0ABM5PE52
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All DBs
Position
complement(1303285..1304175)
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AA seq
296 aa
AA seq
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MLDKPQGVSSNDIMQKVKRLFNANKAGHTGALDPLATGMLPICLGEATKFSQFLLDSDKR
YLVCAKLGERTDTSDADGQVVQTRSVNVSEHDILANLDAFRGDILQVPTMFSALKHNGKP
LYEYARAGINVVREARPITIFELKFIEYQAPFLTLEVHCSKGTYIRTLIDDLGEALGCGA
HVTMLRRIAVADYPFERMMTIENLQNLAENQALATLDKLLLPIDSAVSRLPRINLDELQT
KAVGFGQRLKFANEQHILGAARLFSADGTFLGVAEIREDNVIRPSRMVVIDKDNDV
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
ttgttagataaaccgcagggtgttagttctaacgatattatgcaaaaggtcaaacggcta
tttaatgccaataaagctgggcatacaggcgcgcttgaccctttagcaacagggatgttg
cctatctgcttaggagaagccactaagttttcgcagttcttattagattcggataaacgt
tatttagtttgcgcaaaactcggggagcgtacagatacgagtgatgcagatgggcaagtt
gtgcaaacgcggagcgttaatgtctctgagcatgatattttagcgaatttagatgcattt
cgtggtgatattctgcaagtaccaacgatgttttctgctttaaaacataatggtaaaccc
ttatatgaatacgctcgtgcggggattaatgtagtgcgtgaagcacgtcctattaccatt
tttgagctgaaatttattgaatatcaagcaccatttttgacccttgaagtacattgttca
aaaggaacttatattcgcaccttaattgatgatttaggtgaggctttaggctgtggggca
cacgtgacgatgttacgccgtattgcggttgcagattatccatttgagagaatgatgacc
attgagaatttgcaaaatttagccgaaaatcaagcgcttgccacgttagataagctgctt
ttgccgatagatagcgcggtgagccgtttgccgagaataaatttagatgagttgcaaact
aaggctgttggctttggtcaaaggctgaagtttgctaatgagcagcatattctgggtgca
gcgcgcttattttcagcagatggaacctttttaggtgtagctgaaattcgcgaagataat
gtgattcgaccaagccgaatggtagtgatagacaaggataatgatgtataa
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