Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_1420
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Entry
F543_1420 CDS
T03018
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Pathway
btrh00061
Fatty acid biosynthesis
btrh00071
Fatty acid degradation
btrh01100
Metabolic pathways
btrh01212
Fatty acid metabolism
btrh02024
Quorum sensing
btrh04146
Peroxisome
Module
btrh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
F543_1420
00071 Fatty acid degradation
F543_1420
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
F543_1420
09145 Cellular community - prokaryotes
02024 Quorum sensing
F543_1420
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
btrh01004
]
F543_1420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
btrh04147
]
F543_1420
Enzymes [BR:
btrh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
F543_1420
Lipid biosynthesis proteins [BR:
btrh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
F543_1420
Exosome [BR:
btrh04147
]
Exosomal proteins
Exosomal proteins of breast milk
F543_1420
Exosomal proteins of breast cancer cells
F543_1420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
CHASE3
Motif
Other DBs
NCBI-ProteinID:
AHG83006
UniProt:
A0ABM5PA40
LinkDB
All DBs
Position
144578..146359
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AA seq
593 aa
AA seq
DB search
MAMSSLDFHFINRFRHQAEKLAQRPALRFMQDQQWVDMSWAELQNQVNQLSYALLANGIG
VQDKIAIFAHNMPRWTITDIGAMQIRAVAVPIYATNTAKQVEYVLNDGDIKILFVGDQEQ
FDHALEIAHNCPQLQKIVAMKANIELHHSPLAQHWADFIQVEADESCLQQRLAEKRLDDL
FTLIYTSGTTGEPKGVMLDYANLGHQLQAHDKALPTVDENDISLSFLPFSHIFERAWISY
VLHRGAVNCYLEDPHQVREAMATVRPTLMCAVPRFYEKIYTAVWDKVNHAPVHRRALFNW
AIRTAENEFLGKKNVIFHRLQYRLADKLVLSKLRHLLGGRIRMMPCGGAKLDHSIGLFFQ
SIGVNVKLGYGMTETTATVSCWQEKGFNPNSIGVLMPDMEVKIGEENEILVRGGSVMRGY
YKKPEETAKAFTADGFLKTGDAGELDAEGNLYITDRIKELMKTSNGKYIAPQYIEGKIGK
DKFIEQIAIIADAKKYVSALIVPCFDSLEEYAKKLNITYQDRMELIKNSEVVKMFEQRIN
ELQKDLASFEQVKKFTLLSQAFSTKMEEITPTLKLRRKVILERYKAQIEKMYK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggctatgtcatctctcgattttcattttatcaatcgttttcgtcaccaagcagaaaag
ttggctcaacgccctgcattgcgttttatgcaagatcagcaatgggtagatatgagttgg
gctgagttacaaaatcaggttaatcaactctcttatgctttgcttgccaacggtattggt
gtacaagataaaattgcaatttttgcccataatatgccacgttggacgatcacagatatt
ggtgcgatgcaaattcgcgctgtagctgtgccgatttatgcaacgaatacggcaaagcaa
gtggaatatgtactcaatgatggtgatattaaaattctgtttgttggtgatcaggagcag
tttgaccatgcgcttgaaatagcgcacaactgtccacaattacaaaaaattgttgcgatg
aaagcaaatattgaattgcatcactctccccttgcacaacattgggctgattttatacaa
gtggaagctgatgaatcgtgtttgcaacagcgtctagcagaaaagcgtttagatgatctt
ttcacgcttatttacacttcaggcacaacgggtgagccaaaaggagttatgcttgattac
gccaacttagggcaccaattacaagcacatgataaagcactgccaactgtcgatgaaaat
gacatatcgctctcttttctaccgttttcacatatttttgaacgcgcttggatctcttat
gtattgcaccgtggagcggtgaactgctatttagaagatcctcatcaagtgcgggaagcg
atggcaacggttcgtccaacgttaatgtgtgcagtgcctcgtttttatgaaaaaatttat
actgcggtgtgggataaagtaaaccatgcaccggtgcaccgccgcgctttatttaactgg
gcgattcgcactgcagaaaatgaatttcttggtaaaaaaaatgtgatttttcaccgcttg
caatatcgtctcgcggataaattggtgctctctaagttacgccatttattaggcggtcga
attcgtatgatgccgtgcggtggggcaaaacttgatcattcaattgggctatttttccaa
agtataggtgtcaatgtgaaattaggctacggcatgacagaaacgacagccacggtctca
tgctggcaagaaaaaggctttaatccaaattcaatcggagttttaatgcccgatatggaa
gtgaaaattggagaagaaaatgaaattctagtgcgtggcggttcggtaatgcgtggctac
tataaaaaaccagaagagacagcaaaagcctttactgcagatggttttttaaaaacaggt
gatgcaggggaattagatgcagaaggcaacctttatattacagaccgcatcaaagaactg
atgaaaacctcaaatggcaaatatattgcgccacaatatattgaaggtaaaattggcaag
gataaatttattgagcagattgcgattattgcggatgcaaaaaaatatgtttcagcgctt
attgttccgtgttttgacagcctagaagaatatgctaaaaagctcaatattacgtatcaa
gatcgcatggagctgattaaaaattctgaagtcgttaaaatgtttgaacagcgtattaac
gagttacaaaaggatttggcaagttttgagcaagtgaaaaaatttaccttactttcgcaa
gcatttagtacgaaaatggaagaaatcacgccaacactgaaattgcgccgcaaagtgatt
ttagaacgctataaagcgcagattgagaaaatgtataagtag
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