Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_14340
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Entry
F543_14340 CDS
T03018
Name
(GenBank) hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btrh03019
]
F543_14340
Messenger RNA biogenesis [BR:
btrh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
F543_14340
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
AAA_16
SKI
AAA_28
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AHG84298
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Position
complement(1459924..1460787)
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AA seq
287 aa
AA seq
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MELIIISGRSGSGKSVALRALEDVGYYCVDNIPLPLIPQLTEYAMKTDKSVVVSLDIRNF
PENAREFESILHSLPQCISTKIIFLECERNSLIRRYSDSRRLHPLSSQDLSLESAIDLET
RLLEPLVQQANYIIDTTHLSSHSLAEQLRELLRGSSEKELQIIVESFGFKYGVPADADYV
FDVRFLPNPHWDVELRPMTGLDQPVIAFLEQHAEVHNFIYHTRSYLEMWLPALEKNNRSY
LTIAIGCTGGKHRSVFIAEQIAKYFASRDKKVQVRHRSLEKHHNKKS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggaactcattattattagcggccgttcaggatctggaaaatcagttgccttacgagca
ttagaagatgtgggatattattgtgtggataatatccctttgccgttaataccacagctt
accgaatatgcaatgaaaacggataaatcggtagtggttagcttagatattcgtaatttt
ccagaaaatgcacgagagtttgagtctattttacatagcttacctcagtgtatttcaacg
aaaattatcttcttagaatgtgagcgaaacagcttaattcgtcgctatagcgattctcgt
cgcttacaccctctctctagtcaagatttatctttagaaagcgcgattgatttagaaact
cgtttgcttgaaccattagtgcaacaagcaaattatattattgataccacacatctttct
tctcactctctggcagaacaactgcgtgaattattacgaggctcttcagaaaaagagctc
caaattattgtggaatcttttggctttaaatatggcgttccggcagatgcggattatgta
tttgatgtgcgtttcttacctaatccacattgggatgttgaattacgtccaatgacaggg
cttgatcaacctgttatcgcatttcttgagcaacatgctgaggtgcataattttatttac
cacactcgcagttatttagaaatgtggttgcctgctttagagaaaaataatcgtagttat
ttgacgattgcaattggttgtactggtggcaaacatcgttcggtttttattgcagagcaa
atagccaaatactttgctagtcgcgataaaaaagtacaggtgcgtcatcgcagtttagag
aaacatcataataagaaaagttaa
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