Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_16810
Help
Entry
F543_16810 CDS
T03018
Name
(GenBank) Biofilm PGA synthesis lipoprotein PgaB
KO
K11931
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GHL13
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
AHG84543
LinkDB
All DBs
Position
1725376..1727259
Genome browser
AA seq
627 aa
AA seq
DB search
MTFNNKFKIFLFLFMAIFVRETAAKNNEYHVLAYHSVLDENAPEQDKYYLPQTIPARQLI
AHFNWLKTNGYNVIAWQQVVDAEAGKSSLPDKAVLLSFDDGYESMYSTIFPLLKAYNYPA
VFAPVSSWLNAPTGSQIQYGSTAKLSRNAFAQWHEVAEMQRSGLVEIASHTHDLHYGVNA
NPAGSQIPAVISPIYKNGQYESKQAYRQRLQRDFQASVKFIHQHTGHAPRIIVWPYGQFN
DTAVEVARQAGMPHHFSLDMSKVNRVGDKHIGRLLLDAETSIDTIEEYLAGKTAENGIQR
VIHVDLDYVFDPNPAQQAKNLDALIQRIYDYGITTVYLQAYADQDGNGVADALYFPNKYL
PVKSDLFSQVAWQLISRADVKVYAWMPVLAFDIGEKGEYVLDRRTGKPAENHYLRLNPYS
AKNKAMIQSIYQDLAFYAKFNGILFHDDAFLTDFEINDNSAQKTADLIQFTHELTQSLAP
YFRYGKEKIKTARNIYASLITQPESEAWFAQNFVKFTQHYDTTAIMAMPYMENENSIDAK
EAKAWLDNLIHLVKAENIPLHKVLFELQAVNWRNKKAIPAAEMIDWISTLTKNGIYSFGY
YPDNFINNQPNLKQIRPYMSINQNSTK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgacttttaataataaatttaagatctttttatttctctttatggcaatatttgtcaga
gaaaccgctgcaaaaaacaacgaataccatgtacttgcttatcattcagtgcttgatgaa
aatgcacccgagcaagataaatactatctaccacaaaccattcctgcgcgccaattaatc
gcccattttaattggctaaaaacgaatggctacaatgttatcgcttggcagcaagttgtg
gatgcagaagcaggaaaaagtagtctgccagataaagcggtgctactcagctttgatgat
ggctatgaatccatgtatagcactatttttcccttgctaaaagcctacaactatccagcg
gtatttgctcctgtaagtagctggttaaatgccccaacgggtagccaaattcaatatgga
agcaccgctaaactctctcgcaatgcctttgcccaatggcatgaagtggcagaaatgcag
cgtagtggattagtcgaaatcgcctcacatactcacgatctccactatggggttaatgca
aaccctgcaggtagtcagatccctgcggtaatttcacctatctacaaaaatggtcaatac
gagagcaaacaagcatatcgccaacgtttacaacgcgattttcaggcctctgtgaaattc
attcatcaacatacaggacatgcacctcgaattattgtttggccttatggacaatttaat
gacacagccgtagaggttgctcgccaagcaggtatgcctcatcatttttctttagatatg
agcaaagttaatcgtgtcggtgacaaacatatcgggcgattattactggatgcagaaact
tcaattgatactatcgaagaatatttggcggggaaaacggctgagaatggcatacagaga
gtaatacatgtcgatttagattatgtctttgatcccaacccagcccagcaggctaaaaat
ttagatgcacttattcagcgtatttatgattatggcattacgactgtttacctacaggcg
tatgctgatcaagatggtaacggcgttgctgatgcgctttatttccccaataaatatttg
ccagtgaaatcggatctgtttagccaagttgcttggcaattaattagtcgagccgatgta
aaagtctatgcatggatgcccgtgcttgcttttgatattggtgaaaaaggagaatacgtg
cttgatcgtcgtacaggcaaacctgctgaaaatcactatcttcgcctaaacccttattca
gcaaaaaataaagcgatgattcaatccatttatcaagatctcgcattttatgccaagttc
aatggcattctttttcatgatgatgcattccttaccgattttgagatcaatgataacagt
gcgcaaaagactgcagatttaattcaatttacgcatgaattaacacaaagccttgcacct
tatttccgttatggtaaagaaaaaatcaaaacagcacgtaatatttatgcgtcattgatc
actcaaccggaatcagaagcttggtttgcacagaattttgtaaaatttactcaacactat
gatactaccgccattatggcaatgccttatatggaaaatgagaattcaattgatgctaaa
gaagccaaagcttggctagacaatttaattcatttagtaaaagcggagaatattcctttg
cataaagtactatttgagctacaagcagtaaactggcgtaataaaaaagcgataccagca
gctgaaatgattgattggattagtacattaactaaaaacggcatctatagtttcggttat
tatccagataactttattaacaaccaacctaatttaaagcaaattagaccttacatgtca
attaatcaaaactcgacaaaataa
DBGET
integrated database retrieval system
