Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_16950
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Entry
F543_16950 CDS
T03018
Name
(GenBank) Periplasmic protein
KO
K21470
L,D-transpeptidase YcbB
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
btrh01002
]
F543_16950
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
btrh01011
]
F543_16950
Peptidases and inhibitors [BR:
btrh01002
]
Cysteine peptidases
Family C82
F543_16950
Peptidoglycan biosynthesis and degradation proteins [BR:
btrh01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
F543_16950
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
TENA_THI-4
Motif
Other DBs
NCBI-ProteinID:
AHG84557
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All DBs
Position
complement(1738884..1740569)
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AA seq
561 aa
AA seq
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MRKLPDRLFCKRSVLLNILQMSKLFFGLNMKAFKFLPITILSSAVFAETSAVASATTQVA
EINVATPNALNTVDTVLPQLSFEAQQARAAAMARQAESFIQRAEEERIAAEKLAQAKNRL
NQEIAPNQLLLASTTAKVYLDNEFSSIWSDKRATQLFLKEYAAFAASGVSAKSTKALQQI
LNTPEDSFARDVLLTDSFLDYLYYNKNVGRNADKWLYRLGSYVTKAPAESHVSAWLRAVR
NGSAVQYISALIPNNHIYRETVDRLFTMSPNSTAGVAKKAANSKNTKGQKGKAQESAVAG
GSTTFAKLALNAQRLRLIPSFTNGIFVNIPSYQLYYMRDGKQVLQSKVIVGRDDRRTPVM
YSKLSNVVVNPPWNVPPTIKAKDLIPKFSRNPGMVERSGYEILDGRGNKISPSNINWAQY
KGKENTFPYHIRQKPGDNAALGLYKFNMPSSDAIYLHDTPNRGLFGKNDRALSSGCVRVA
KSDELATLLLKEAGWSDSKKQGVLASRKTTSVPIRSDNPVYLYYVTAWVENGKVHTLPDI
YKYDVNLPRVSIDWMKVKNVI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaaaattaccagaccgcttgttttgtaagcggtctgttttattaaacattttgcaa
atgagcaaattattttttggattaaacatgaaagcgtttaagtttttacctattacgata
ttgagttctgctgtttttgcagaaacatcggcagtagcaagtgcgacaactcaagttgca
gaaataaatgttgccacaccaaatgcgttaaatactgttgatacggtattgccgcaatta
agttttgaagctcagcaagcaagagcagcagcaatggctcggcaagcagaaagttttatt
caacgtgcagaagaagagcgaattgcagcagaaaaacttgcgcaagctaaaaatcgcctt
aatcaagaaattgcaccaaatcaattattgttagcatctacaacagctaaggtttattta
gataacgaatttagttcaatatggtctgataaacgggcaacacagctatttttaaaagag
tatgctgcttttgcagccagtggagtttctgcaaaatcaacgaaagcactacaacaaatt
ctaaatacgccagaagatagtttcgctcgtgatgttttattaacagacagttttttagat
tatctgtattacaataaaaatgtgggacgtaatgcagataaatggctatatcggttaggc
agctacgtaactaaagctccggctgaaagtcatgtttctgcttggttacgggctgtcaga
aatggctctgctgtacaatatatttctgctcttataccaaataatcatatttaccgtgaa
acggtagatagattgtttacaatgtctccaaatagcacggcgggtgtcgctaaaaaagct
gcgaacagcaaaaataccaaaggacaaaaagggaaagctcaagagtctgcagtagcaggg
ggaagcacgacatttgcgaaattagcattgaatgcacaacgcttacgtttaatcccaagc
tttactaatggtattttcgttaatattccaagttatcagctttactatatgcgtgatggc
aagcaggttttgcaatctaaagtgattgttggacgagatgaccgccgcacaccagttatg
tatagcaaattaagtaatgtggttgtgaatccgccttggaatgtaccgccgacaattaaa
gctaaagatcttattcctaaatttagccgtaatccaggtatggtagagcgttcaggctat
gagattttagatgggcgtggtaataagattagcccaagtaatatcaattgggcgcaatat
aaaggtaaagagaatactttcccttatcatattcgccaaaaaccgggtgacaatgctgca
ttgggattgtataaattcaatatgccaagctctgatgctatttatttgcatgatacacct
aaccgaggtctatttggtaaaaatgatcgtgcgttaagctcagggtgtgttcgtgtggca
aaatcagatgaactcgcgacattattattgaaagaagcgggttggagtgatagtaagaag
caaggtgtattagccagccgtaaaacaacttcggtgccaattcgttcagacaatcctgtt
tatttgtattatgtcacggcgtgggtagaaaatggtaaagtgcataccttgcctgatatc
tataaatatgatgttaatcttccgcgagtctcaatagattggatgaaggttaaaaatgtg
atctag
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