Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_19730
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Entry
F543_19730 CDS
T03018
Name
(GenBank) RNA polymerase-associated protein rapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btrh03021
]
F543_19730
Transcription machinery [BR:
btrh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
F543_19730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
TmcA_N
Flavi_DEAD
sCache_like
Motif
Other DBs
NCBI-ProteinID:
AHG84834
UniProt:
A0ABM5PET0
LinkDB
All DBs
Position
complement(2032664..2035567)
Genome browser
AA seq
967 aa
AA seq
DB search
MNFVVGQRWISESENNLGLGIVRAVDVRTVTIDFPAADEQRVYAVAVAPLTRVQFQQGDT
VSSAEGWQLSISDVVENQGVLIYLGKRLDSDEEAVLPETLLDHKVSFSKPQDRLFSAQID
RSDRFALRYRALQHQQEQFQSPLRGLRGIRASLIPHQLHIAQEVGQRVAPRVLLADEVGL
GKTIEAGMILQQQLFSGRVERVLVLVPESLQHQWLVEMLRRFNLNFSLFDEERCADFDRE
EAEESQNPFETESMVIASIDWLEKSPKRAEQVLGSEWDLMIIDEAHHLEWNEQAPSLAYR
FVEQLAAKIPAVLLLTATPEQLGQESHFARLKLLDPNRFFDYQEFVKEQQQYQPVADAVA
TLLNDAPLSNAEQNAISELLSEQDVEPMLRIINSDADIEQKQAVRQELISELIDRHGTSR
VLFRNTRQAVKGFPHREYHQINLAMPKQYANALKVMGMMSGKKLEDLLYPERLFQRMNPN
AAWYDFDPRIEWLITFLKSHRDEKILVICKQADTAIQLEQALREKEAIRSAVFHERMTIV
ERDKAAAYFADLEEGAQVLISSSIGSEGRNFQFARHLVLFNLPDNPDLLEQSIGRLDRIG
QKHDIQIYVPCFEQSAQHVLADWYHSGLNAFEETCPMGAALFREYAEQLNSYLLEPQAVE
NFTEFAKQTAKRREQLKAELEQGRDRLLELNSNGGELAQETANAIAEQDSDPKLVSFALK
LFDVIGLEQEDLGEKSIVISPTGHMLVPDFPGLSEEGNTVTFERELALMREDVLFLTWDS
PMIRNGIDLITAGDIGKSAVSLLVNKNLPAGTLLLEAIYVVEAQAPKGLQLTRFLPPTPV
RVLLDNKGNNLAAQVSFTGLEKQLKPMGKQMANKIVKMARSDIEKLIAFGEQKIAPLAEN
LIMQAKAECDRKLSAELHRLQSLQAVNKNIRDDEIATLESIKARSLEQLNQANWRLDSLR
LIVSNQA
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgtagttggacaacgctggatcagcgaaagtgaaaataatttagggctaggt
attgtacgggcggtggatgtgcgtactgtaacgatagatttcccagccgcagatgaacaa
cgcgtgtatgcggtggctgtggcgccattaactcgcgtgcagtttcagcaaggtgatacg
gtgagtagcgcggagggttggcaacttagcatcagtgatgtagtagaaaatcaaggcgtg
cttatttatttaggtaagcgcttggatagtgatgaagaagcggtgctgccggaaacatta
ctggatcacaaagtgagttttagtaaaccacaggatcgtttattctctgctcaaattgat
cgtagcgatcgatttgctttgcgttatcgcgcattgcagcaccagcaagaacagtttcaa
tcaccattgcgcggattacgcggtattcgagcaagcttgattccacaccagctgcatatt
gctcaagaagtgggacagcgtgtagctcctcgtgtgttacttgccgatgaggtggggtta
ggaaaaacgattgaagctggcatgattttgcagcaacagcttttctctggcagagtagag
cgagtgctggtgcttgtgcctgaaagcttacagcatcaatggctggtggaaatgctccgc
cgttttaatctcaatttctcgttatttgatgaagaacgctgtgcagattttgacagagaa
gaggcagaagagagccaaaatccatttgaaacggaaagtatggtaattgcttctattgat
tggttggaaaaatcgccaaaacgtgccgaacaagtgctgggaagtgaatgggatttaatg
attattgatgaagcacaccatttagagtggaatgagcaagcgccgagcctcgcttatcgt
tttgttgaacagcttgctgccaaaattcctgccgtattgttgctgacggcaacccctgaa
cagcttgggcaagagagccactttgcccgtttgaaattgcttgatccaaaccgtttcttt
gattaccaagaatttgtcaaagaacagcaacaatatcagcctgttgctgatgcggttgca
acattactcaatgatgcgcctttatccaacgcagagcagaatgctattagcgaattatta
agtgagcaagatgttgaaccaatgttacgcattattaatagcgatgcggatattgagcaa
aaacaggcggtacgccaagagctgatcagtgaacttattgaccgccatggcacaagccga
gtgttgttccgtaacacgcgtcaagctgttaaaggcttcccacatcgtgagtatcatcaa
attaatttagcgatgccaaaacagtacgctaatgctctcaaagtgatgggcatgatgagc
ggtaaaaagctggaagatttgctctatcctgaacgcctattccaacgaatgaatccgaat
gcggcttggtatgatttcgatccacgcattgagtggttaattacttttctgaaaagccat
cgagatgagaaaattttagtgatctgtaaacaagcagacaccgccattcagcttgaacaa
gcccttagagagaaagaagcgatccgttccgctgtgttccacgaaagaatgacaattgtt
gagcgagataaagccgcggcttactttgccgatttggaagaaggcgcacaggtgttgatc
agctccagtatcggctcagaagggcgaaatttccagtttgctcgtcatttagtgctgttt
aatctgcctgataatcctgatttactagagcagagtattgggcgtttagatcgtattgga
caaaaacatgatattcaaatttatgtaccatgctttgaacaatctgcacagcatgtgctt
gcggattggtatcacagtgggttgaatgcctttgaagaaacctgcccaatgggggcggca
ctattccgagaatatgctgagcagctcaatagctatctgcttgagccacaagcggttgaa
aatttcactgaatttgcaaaacagaccgccaaacgccgagagcaactgaaagcagagcta
gagcaagggcgggatcgtttattggagcttaattctaatggtggcgagttagctcaagaa
acggcaaatgcgattgccgaacaagatagcgatccaaaattggtgagttttgcactaaaa
ctgtttgatgtaattgggcttgaacaggaagatttaggtgaaaaaagcattgtgattagc
ccaacagggcatatgctcgtaccagatttcccagggctttcggaagaaggaaatacggtc
acttttgaacgggaattagccttaatgcgtgaagatgtgctgtttttaacttgggatagc
ccaatgattcgcaacggtattgatttaattacggctggtgatattggtaaatccgccgtt
tcattattggtgaataaaaatttacctgctggaacactattacttgaggcaatttatgtc
gtggaagcgcaagcaccaaaaggtttgcagctcactcgcttcttgccaccaacgccagtg
cgagttttactggataataaaggcaacaatctcgctgcgcaagtctcgtttaccggtttg
gaaaaacagctgaaaccgatgggtaaacagatggcaaataaaattgtgaaaatggctcgt
tcagatattgagaaattaattgcctttggggaacagaaaatagcgccacttgcagaaaat
ttaattatgcaggcaaaagcggaatgtgatcgcaagttatccgcagaattacatcgcttg
caatcgctccaagcagtgaataaaaatattcgcgatgatgaaattgcaacgttggaaagc
attaaagcgcgatcgcttgaacaacttaatcaagcaaattggcggttagatagcttgcga
ttgattgtgagtaatcaagcatag
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