Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_20920
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Entry
F543_20920 CDS
T03018
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btrh03021
]
F543_20920
Transcription machinery [BR:
btrh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F543_20920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
UCR_14kD
GntR
Astro_VPg
Motif
Other DBs
NCBI-ProteinID:
AHG84950
LinkDB
All DBs
Position
complement(2178026..2178997)
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AA seq
323 aa
AA seq
DB search
MIKKAELKPFDDEIEEAELIDIEEVSPEDIEILEAAHVPEEHPALANSMVVSQGNLDSYI
RMANQYPILTAEQEKALAERFYYDEDLDAAKQLILSHLRFVVHIARGYMGYGLPLADLIQ
EGNIGLMKAVKRFNPEVGVRLVSFAVHWVKAEIHEYVLRNWRIVKVATTKAQRKLFFNLR
KNKQRLAWFNEEELQKVADDLGVSPDDVREMESRMTGQDMGFDLPVGSDDDEAYVPSMYI
EDDRSNFADELEDEQYNGKATAQLAYALAQLDERSQDIIKTRWLDEDKATLHELAAKYNI
SAERVRQLENQALKKIKDCIVME
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaagccgaattaaagccgtttgatgatgagattgaagaagcggaacttatt
gatatagaagaagtatctccagaagatattgagattctggaggccgctcatgtgccggaa
gagcaccctgcgcttgccaacagtatggtggtttctcagggtaatttagatagttatatt
cgtatggcaaatcaatacccgattctaacggctgagcaagagaaagcgctggcagagcgt
ttttattacgacgaagatttagatgcggcaaaacagcttattttgtcgcatttgcgcttt
gttgtgcatattgcgcgcggttatatgggctatggtttaccacttgcggatttaatccaa
gaaggcaatattggcttgatgaaggcggtaaaacgttttaatccagaagtgggcgtacgt
ttggtttcgtttgcggtgcattgggtaaaagcggaaattcatgaatatgtattacgcaac
tggcgaattgtaaaagtggcaaccacaaaagcgcagcgtaaattgttttttaacttacgt
aaaaataagcaacgcttggcgtggtttaatgaagaagagctgcaaaaagtagccgatgat
ttaggcgttagccctgacgatgtacgagagatggaatctcgaatgacagggcaagatatg
ggatttgatttacctgtgggtagcgatgatgacgaagcttatgtgccgtccatgtatatt
gaagatgatcgctcaaactttgccgatgagctagaagacgagcaatacaacggtaaagca
acagcccaacttgcctatgcattggcacaactagatgagcgtagtcaagatattatcaaa
acgcgctggctagatgaagataaagcaactttgcatgagcttgccgcaaaatacaatatt
tctgctgagcgagtacgtcaattagaaaatcaagcgttgaagaaaattaaagactgcata
gtgatggaataa
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