Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_22960
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Entry
F543_22960 CDS
T03018
Name
(GenBank) Synthetic iM2 transcription activator
KO
K18476
TetR/AcrR family transcriptional regulator, tetracycline repressor protein
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
btrh03000
]
F543_22960
Transcription factors [BR:
btrh03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
F543_22960
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_1
TetR_N
HTH_Tnp_1_2
HTH_20
HTH_24
CENP-B_N
UBA
Motif
Other DBs
NCBI-ProteinID:
AHG85151
LinkDB
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Position
2371899..2372522
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AA seq
207 aa
AA seq
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MAKLDKEQVIDNALILLNEVGIEGLTTRKLAQKIGVEQPTLYWHVKNKRALLDALAETIL
QKHHHHVLPLPNETWQDFLRNNAKSFRQALLMYRDGGKIHAGTRPSESQFETSEQQLQFL
CDAGFSLSQAVYALSSIAHFTLGSVLETQEHQESQKEREKVETDTVAYPPLLTQAVAIMD
SDNGDAAFLFVLDVMISGLETVLKSAK
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagctagataaagaacaagttattgataatgcgttgattttacttaatgaagtt
ggtattgaaggattaacaacgcgtaagctggcgcaaaaaataggtgtggaacaacccaca
ttgtattggcatgtaaaaaataaacgcgctttgttagatgcattagcagaaactattttg
caaaagcaccatcatcatgttttgccattgccgaatgaaacatggcaggactttttgcga
aataacgcgaaaagcttccgccaagccttattaatgtatcgtgatggtggcaaaattcat
gcgggaacacgcccctctgaaagtcaatttgagacatcagaacagcaactacagtttttg
tgtgatgctgggtttagtctatctcaagccgtgtatgcattaagctctattgcgcatttt
acattaggctccgtactggaaactcaagagcatcaagaaagccaaaaagagcgtgaaaaa
gtagagacggatactgttgcctatccgccattattaacccaagccgttgcaattatggat
agtgataatggtgatgctgcatttttgtttgtccttgatgtgatgatctctggacttgaa
acagtattaaagagcgctaaataa
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