Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_3840
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Entry
F543_3840 CDS
T03018
Name
(GenBank) Ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
btrh03009
]
F543_3840
Enzymes [BR:
btrh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
F543_3840
Ribosome biogenesis [BR:
btrh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
F543_3840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
AHG83248
UniProt:
A0ABM5PCU1
LinkDB
All DBs
Position
complement(366068..367027)
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AA seq
319 aa
AA seq
DB search
MNDKVLSASVQFFTISDDESGQRLDNFLLAKLKGVPKSLIYRIVRKGEVRVNKGRIKPEY
KLQDGDVVRVPPVRVAEKNAPQISTKLNKVAELEQQILFEDDVMLIINKPSGIAVHGGSG
LSFGVIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRSLHEQLREKVVQKDYLA
LVRGQWQSHVKVIKAPLLKNELASGERIVKVSQDGKPSETRFRIEERYASATLVKASPVT
GRTHQIRVHTQYAGHPIACDDKYGERDFDQKMQEIGLNRLFLHAYSIRFQHPKTGEEMVV
TAPLDKKLKGVLAKLRTMQ
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaaagtcctcagtgccagtgtgcagttttttaccatcagcgatgatgagagc
gggcaacgccttgataatttcttacttgccaaactcaaaggggtgcccaaaagccttatt
tatcgtattgtgcgaaaaggcgaagtgcgagtaaacaaaggcaggattaagcctgaatac
aaattgcaagatggcgatgtagtacgagtgccgcctgtgcgtgttgcggaaaaaaatgcc
ccacaaatctcaactaaactaaataaagttgccgaattagagcaacaaattctgtttgaa
gatgatgtaatgctaattatcaacaaaccgtcaggcattgcggtacacggtggtagtggg
ttgagttttggggtaatcgaagccttgcgtgcgttacgtccacaagctcgttttttagaa
ttagtccaccgtatcgaccgtgatacttcgggcatcttgcttgttgccaaaaaacgctct
gctttacgttcgcttcacgagcaactgcgagaaaaagtggtgcagaaagactatcttgcc
ttggtgcgtgggcagtggcaatcacacgttaaagtaatcaaagcccctttgctgaaaaat
gaacttgctagcggtgagcgaattgtcaaagtcagccaagacggcaaaccatcagaaacc
cgtttccgcattgaagaacgttacgcaagtgctacgcttgtgaaagcatccccagtaaca
ggcagaacccaccaaatccgtgtgcatacccaatatgcaggtcacccaatcgcttgcgat
gataaatatggtgaacgtgattttgaccaaaaaatgcaagaaattggcttaaaccgctta
tttctccacgcctattcaatccgattccaacacccaaaaacaggggaagaaatggtcgtc
actgcaccgctggataagaaattgaaaggggttttggcgaagttgagaacaatgcaataa
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