Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_440
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Entry
F543_440 CDS
T03018
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
btrh03009
]
F543_440
Enzymes [BR:
btrh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
F543_440
Ribosome biogenesis [BR:
btrh03009
]
Prokaryotic type
ribosomal protein modification factors
F543_440
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
CLP1_P
TRAM
ACP_syn_III
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AHG82908
LinkDB
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Position
42396..43727
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AA seq
443 aa
AA seq
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MSSAPNIGFVSLGCPKNLVDSERILTELRSDGYNIIPTYEGADLVIVNTCGFIDSAVQES
LESIGEALENNGKVIVTGCLGAKENQIREVHPQVLEITGPHSYEAVMQHVHKYVPKPEYN
PYTSLVPKQGIKLTPKHYAYLKISEGCDHRCTFCIIPSMRGDLDSRSIVQVLDEAKRLVD
AGVKEILVVSQDTSAYALDKKKENSAKTVFWNGMPIKNDLGTLCEKLGSLGVWVRLHYVY
PYPHVDDLIPLMAEGKILPYLDIPLQHASPKILKAMKRPGSIERTLERIKKWREICPELT
LRSTFIVGFPGETEEDFQMLLDFLKEAQLDRVGCFKFSPVDGAVATDMPDQVPEEVKEAR
FHRFMALQQEISAARLQAKVGKTLQVIVDEIDEEGIIGRSQADAPEIDGVVYVDNLSGTD
VAVGQIISVKITNADEYDLWGTC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagcaccgaatatcggctttgtgagccttggttgcccgaaaaatttagtggac
tccgaacgaattttaacggaattgcgctcggatggttataacattatccccacctatgaa
ggcgcggatttagtcattgtaaatacttgtggttttattgatagcgcagtacaagaatca
ctggaaagtataggtgaagctttagaaaataacggcaaagttattgtaacaggttgtttg
ggagcaaaagagaaccaaattcgtgaggttcatccacaggtgttggaaatcacaggccca
cacagctacgaagctgtcatgcagcacgtacataaatatgtgccaaaaccagaatataac
ccttacactagtcttgtgccgaaacaaggcattaaactcacaccgaaacactatgcttat
ctgaaaatttcagagggctgtgatcatcgttgtaccttctgtattatcccatcaatgcgt
ggcgacttagatagtcgttctatcgtgcaagtgttagatgaggcgaaacgccttgttgat
gcaggcgtaaaagaaattttggtggtttcacaagacacatcagcttatgccttggataag
aagaaagaaaattctgccaaaaccgtattttggaacggtatgccaattaaaaacgatttg
gggacgttatgtgaaaagctcggctctcttggcgtttgggtacgtttgcattatgtttat
ccttatccgcatgtagatgatttaattcctcttatggcagaagggaaaattctgccgtat
ttagatattccattgcaacacgctagtccaaaaattcttaaagcaatgaaacgcccaggg
agtatagagcgtacattagaacgtattaaaaagtggcgtgagatttgtcctgaattgacg
ttgcgttctactttcattgttggttttcctggggaaacagaggaagatttccaaatgttg
ttggatttcttaaaagaagcgcagcttgatcgtgtgggctgttttaaatttagtccagta
gatggtgcagtggcaacggatatgccggatcaagtgccagaagaggtgaaggaagctcgt
ttccatcgttttatggcgttgcaacaagagatttcagctgctcgcctgcaagccaaagtg
ggaaaaaccttgcaagtcattgtggatgaaattgatgaagaaggcattattgggcgctcg
caagctgatgcaccagaaattgatggtgtcgtatatgtagataatctctcaggaacagat
gttgcggtcggtcagattatttcggtcaaaattaccaatgcagatgaatatgatctgtgg
ggaacctgttaa
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