Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_7260
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Entry
F543_7260 CDS
T03018
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Pathway
btrh03030
DNA replication
btrh03430
Mismatch repair
btrh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F543_7260
03430 Mismatch repair
F543_7260
03440 Homologous recombination
F543_7260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btrh03032
]
F543_7260
03400 DNA repair and recombination proteins [BR:
btrh03400
]
F543_7260
Enzymes [BR:
btrh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F543_7260
DNA replication proteins [BR:
btrh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F543_7260
DNA repair and recombination proteins [BR:
btrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F543_7260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AHG83590
LinkDB
All DBs
Position
complement(696794..700222)
Genome browser
AA seq
1142 aa
AA seq
DB search
MINGLAKVKPLVKACIANNMVAMAISDFSNFCGLVRFYGEAQGSGVKPIVAMDVLVRPEP
ESEERFELTLLAKNNTGYQNITLLISRSYQQGYFDLPVLEKAWLAELADGIIVLSGGRMG
DVGKALLKENDIEAENLLSFYQQHFPNHYYLSLCRTGRVDEERYIQQAVKFAKKFAIPLV
AVNDVMFLKEEDFEAHEIRVAIHDSYTLDDPKRPKKYSPQQYFRSEAEMCQLFADLPQAL
ENTVLIAKRCNVTIRLGEYFLPNFPTGELSTEDYLVQKSREGLEERLEFLFPDPEERKNK
RSVYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNGIPVGPGRGSGAGSLVAYALKIT
DLDPLEFDLLFERFLNPERVSMPDFDVDFCMEGRDRVIEHVSETYGRQAVSQIITFGAMA
AKAVVRDVGRVLGHSYSFCDRISKLIPPTPGMTLEQAFKEEPKLQELYDSDEEVEALIDM
ARKLEGVTRNFGKHAGGVVIAPTAITDFSPLYCDNEGLHPVTHFDKNDVEYAGLVKFDFL
GLRTLTIIKWALEMINTRLEKEGKAPVRIESIPLDDKKSFDLLLKSKTTAVFQLESRGMK
DLISRLKPDCFEDIIALVALFRPGPLESGMVQNFIDRKHGKEEVSYPDPQYQHECLKPIL
EPTYGVIVYQEQVMQIAQALAGYTLGGADLLRRAMGKKKPEEMAKQRSVFEAGAEAKGIN
GELAGKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTSEMDNTDKI
VGFYDECINMGLTVVPPDVNSGKYRFSVNEKGEIVYGLGAIKGVGEGPVEELLRVREEGG
IFKDLFDLTARVDLKKLNRKTFEGLIMSGAFDKLGPHRAALMKNLEDALKASDQHAKMEE
LGQSDMFGVLTETPEEVQNAYANTPKFSEQVILDGEKSTLGLYLSGHPVGRFLKELAHYA
PTRLNELQPTFRGQNITVAGIVMASRIAVTKRGNRIGIATIEDRSGKLDLTLFSEALENY
GDLLQKDAIIIATGSVQHDDFSGGLKMSVREVASLDEARSRYAKSLALAINQEQITPAFI
KDLKGIIEPNKEGTLPLHFYYQSPTGRALVRGGVEWRVTPKENMLVQLKTLLGENAVELE
FE
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgattaatggcttagccaaagtgaagccattagtaaaagcctgcattgccaataatatg
gtggcaatggcgatctccgattttagtaacttttgtggacttgtgcgtttttatggcgaa
gcacagggctcaggcgttaaaccaattgttgcgatggatgttctcgttcgcccagagcca
gagagtgaagagcgctttgaactgacactgcttgccaaaaataatacaggttatcaaaat
attaccttactcatttcaagatcctatcaacaaggctattttgatctccctgtgctagaa
aaagcatggcttgctgagcttgccgatggcattattgtgctatctggtgggcgaatggga
gatgtcggcaaagccctgctcaaagaaaacgatattgaagcagagaacttacttagtttt
tatcagcaacattttccaaaccactattatctttctctttgtcgaacaggacgtgtagac
gaagaacgctacattcagcaagcggtcaaatttgccaaaaaatttgccattccgttagtg
gctgtcaatgatgtgatgtttctcaaagaagaagactttgaagcacatgaaattcgagtt
gctattcacgatagctacactcttgatgatcctaaacgccctaaaaaatactcaccacag
caatatttccgttcagaggcggaaatgtgccaactcttcgccgatttaccacaagcctta
gaaaatacggtgctaattgccaaacgctgtaatgtgacgattcgtttgggtgaatacttt
ttgccaaatttcccaacgggcgagctgtctaccgaagactatttagtacaaaaatctcgc
gaaggtttggaagagcggcttgaatttctcttcccagatcccgaagagcgaaaaaacaag
cggtcggtttatgacgaaagattgcaagttgagctagacgtgattaaccagatgggcttc
cctggttacttcctgatcgtgatggaatttatccagtggtcgaaagacaatggtatccct
gtaggccctgggcgtggttctggtgctggctcgttggtggcatatgcattaaaaattacg
gatttagatccactcgaatttgatcttcttttcgagcgtttcttaaaccctgaacgtgtt
tcaatgcccgattttgacgtggacttctgtatggaagggcgagatcgagtcattgagcac
gtttcagaaacttacggtcgccaagccgtttcacaaattatcacctttggtgcgatggcg
gcaaaagccgttgtgcgtgatgtagggcgtgtgcttggacactcctacagtttttgcgac
cgcatttccaaactcattccacctaccccaggtatgacactggaacaggctttcaaagaa
gagccaaagctacaagaactgtacgacagtgatgaggaagttgaagcactgatcgacatg
gctcgcaagcttgaaggtgttacccgtaacttcggtaaacacgcaggtggggtagtgatt
gccccaaccgcgattactgatttctcaccactctattgcgataatgaagggctacaccct
gttacccattttgataaaaatgatgtggaatatgcagggctggtaaaattcgacttctta
gggttacgtacgctcactatcatcaaatgggcgttggagatgattaatactcgccttgaa
aaagagggtaaagcaccagtacgtattgaaagcattccattagatgataaaaaatctttc
gaccttttactgaaatctaaaaccaccgcggtattccagttggaaagtcgcggcatgaaa
gatctgatttctcgcctaaaacccgactgttttgaagatattattgcactagtggctctg
tttcgtcctggacctctagaatcgggcatggtgcagaactttatcgaccgtaaacacggt
aaagaagaagtttcttaccccgatccacaatatcagcacgagtgtttaaaaccgatttta
gagcccacttacggtgttattgtttatcaagagcaggtgatgcagatcgcacaagcgctt
gcaggttatacactgggtggagcggatttacttcgtcgtgcgatgggtaagaaaaagcca
gaagaaatggcaaaacagcgctcagtatttgaagcaggtgcagaagccaaagggatcaat
ggtgaattagcgggtaaaattttcgaccttgtagagaaattcgctggttacggctttaac
aaatctcactctgctgcctatgcgttagtctcctatcaaaccttatggctcaaagcacat
taccccgcggaatttatggcagcggtgatgacttccgagatggataataccgataaaatt
gttggcttctatgatgaatgtatcaatatggggctaaccgttgtaccaccagatgtaaac
agcggaaaataccgttttagtgttaatgaaaaaggtgagattgtttacggtttaggcgca
attaaaggcgtaggcgaaggcccagttgaagagttattacgggtacgtgaagaaggggga
atttttaaagatctattcgatctcaccgctcgtgtcgatttgaaaaaactcaatcgcaag
acctttgagggactgattatgtcaggcgcattcgataaactagggccacaccgtgctgcc
ttgatgaaaaatttagaagatgcattaaaagcttctgatcaacacgctaaaatggaagaa
ttggggcagagtgatatgttcggcgtactcactgaaacccctgaagaagtgcaaaatgcc
tatgccaataccccaaaattctctgaacaagtgattttagatggagagaagagcacgctt
ggcttatatttaagtggacatccagtgggacgtttcttaaaggaattggcacattatgct
cctactcgtttaaacgaattacaacccacttttcgtggacaaaatattaccgtagcaggg
attgtgatggcttctcgtattgcggtaacgaaaagaggcaaccgtatcggcattgccact
attgaagatagatcgggtaaactggatctcacgctattttcggaagcattggaaaactat
ggtgatctcttacaaaaagatgccattattattgccacaggttcagtacagcacgatgat
tttagtggcggtttaaaaatgtcagtgcgtgaggtggcaagcctagatgaggctcgtagc
cgctatgcaaaaagcttagcacttgcgattaatcaagaacaaattacgcctgcgtttatt
aaagatcttaaagggattattgaacccaataaagagggcactctgccactacatttttac
taccaaagccctacaggacgtgcattggtacgtggtggcgttgaatggcgagtaacacca
aaagaaaatatgctggtgcaattaaaaaccctacttggtgaaaatgcagtagagttagaa
tttgagtga
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