Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_8510
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Entry
F543_8510 CDS
T03018
Name
(GenBank) Poly(A) polymerase (PAP) (Plasmid copy number protein)
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Pathway
btrh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F543_8510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btrh03019
]
F543_8510
Enzymes [BR:
btrh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
F543_8510
Messenger RNA biogenesis [BR:
btrh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
F543_8510
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AHG83715
LinkDB
All DBs
Position
complement(824007..825215)
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AA seq
402 aa
AA seq
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MLLEHKAKDFDIATNARPEEIQKIFGRQCRLIGRRFRLAHIVFGREIYEVATFRGNHQSS
SNDKISKTSEEGMLLRDNVYGTLREDAERRDFTVNSLYYDLQHNLIFDFFNGIDDIRAGH
LRLIGDPVQRYQEDPVRMLRAIRFMAKLDMFLDKASDTPIKKMAYLLGNIPAARLFEESL
KLLQSGAGFKTYELLRQYGLFEQLFPVLTPFFTEHQDSNAERMISKALQSTDDRIRDNLR
VNPAFLFAALLWYPLREKIDELKNEGGLNPYDAMQLAANDILAESCKAVALHRRHTAVIR
DIWQLQFQFPKRTGKRPMQTLEHIKFRAGFDLLVMRAEIEGGDLVELSAWWHEFQFSNEA
QRAEQLKNVKHIPSFKDEQPKKKRKPRRRVYRKKKALTGEIA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgttacttgaacataaagccaaagattttgatattgccactaatgctcgccctgaagaa
atccaaaaaatttttggtagacagtgccgcctcatcggccgacgtttccgcttagcgcat
attgtgttcggtcgtgaaatttatgaagttgccactttccgcggcaaccatcagtcaagc
tcgaacgacaaaatttctaaaacaagcgaagaaggaatgcttctacgtgataacgtttac
ggcactctacgcgaagatgctgaacgtcgagattttaccgtaaattcactctattacgat
ctacagcataatctgatttttgatttttttaatggtatcgacgatattcgagcaggacat
ctgcgtttaattggtgatcctgtacaacgttaccaagaagaccctgtccgtatgctacgt
gcgatccgttttatggcaaaattggatatgttcttggataaagcaagtgatacccccatc
aaaaaaatggcatatttactggggaacatccctgctgcccgcttatttgaagaatcgctt
aaattattacaatcaggcgcgggcttcaaaacttatgaattattacgccaatatggtcta
tttgaacagcttttccctgttttaacgccatttttcactgagcatcaagatagcaatgca
gagagaatgattagcaaagcgctacaatctaccgatgatcgtattcgcgataatttgcga
gtcaatcctgcctttttatttgctgcactgctttggtatccactgcgagaaaaaattgac
gaactcaaaaatgaaggtggcttaaacccttatgatgccatgcaacttgcggcaaatgat
attctcgctgaaagttgtaaagccgtagcgttgcatcgccgtcatacagcagttattcgt
gatatttggcagttgcagtttcaattcccaaaacgcacaggtaaacgtccaatgcaaacg
ctagaacatatcaaattccgtgcaggctttgatttattggtgatgcgtgcggaaattgaa
ggaggcgatttagtggaattaagtgcgtggtggcatgagttccaattcagcaacgaagcc
cagcgtgctgaacagctcaaaaacgtgaaacatattccctcttttaaagacgagcaacca
aagaaaaaacgtaaaccacgccgccgtgtttatcgtaagaaaaaagcactaacaggagaa
atcgcatga
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