Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_9650
Help
Entry
F543_9650 CDS
T03018
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
btrh03016
]
F543_9650
Enzymes [BR:
btrh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
F543_9650
Transfer RNA biogenesis [BR:
btrh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F543_9650
Prokaryotic type
F543_9650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AHG83829
LinkDB
All DBs
Position
943122..943910
Genome browser
AA seq
262 aa
AA seq
DB search
MMKIALGIEYDGSRYFGWQRQQEVASIQQCLEEALSKIANAPCEVFCAGRTDAGVHGTGQ
VVHFETNIERPLKSWCFGTNAHLPEDIAVKWAVEVPEDFHARFSATARRYRYIIFNHRLR
SAILPKGISHYYHDLDAEKMHQAGQFLLGENDFSSFRAAQCQSHTPWRNVHHLNVWRQGH
YIIVDIQANAFVHHMVRNIVGSLIEVGQGRQPIEWIKWLLEQKDRTLAAPTAKAEGLYLV
DVSYPEQFSIPKKTLGPLFLAD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaattgcactcggaattgaatatgatggtagccgctattttggttggcaacgc
cagcaagaagtggcttcaatacagcaatgtttggaagaagcgttaagcaaaattgctaat
gcaccttgcgaagttttttgtgcagggcgaactgatgcaggcgttcacggcacggggcaa
gtggtgcattttgaaacgaatatagaacgtccactcaaaagttggtgctttggcacaaat
gcacatttgcctgaggatattgcggtaaaatgggcagtggaagtacctgaggattttcat
gctcgctttagtgcgacagctcgtcgttatcgctatattatttttaatcaccgcttgcgt
agtgctattttacctaaaggaatttcacattattatcatgacttagatgcagagaaaatg
caccaagccggacaatttttactcggggaaaatgatttctctagttttcgtgcagcgcaa
tgtcaatcacatacaccatggcgtaatgtgcaccatcttaatgtttggcgacaaggacat
tatattattgtggatattcaagcgaatgcttttgtgcatcatatggtgcgtaatattgtt
ggcagtttgattgaagttgggcagggacgacaaccaatagaatggattaaatggctgctt
gagcaaaaagatcgtacattggctgccccaactgccaaggcagaaggattatatctagtg
gatgtgagttatcctgaacaattttccatacctaaaaaaactttagggcctttattttta
gccgattaa
DBGET
integrated database retrieval system
