Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_980
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Entry
F543_980 CDS
T03018
Name
(GenBank) HTH-type transcriptional regulator gntR
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
btrh
Bibersteinia trehalosi USDA-ARS-USMARC-189
Brite
KEGG Orthology (KO) [BR:
btrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
btrh03000
]
F543_980
Transcription factors [BR:
btrh03000
]
Prokaryotic type
Helix-turn-helix
LacI family
F543_980
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GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_10
HTH_23
Hpr_kinase_N
HTH_IclR
HTH_3
Sigma70_r4
HTH_24
HTH_Crp_2
HTH_11
HTH_22
HTH_Tnp_4
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AHG82962
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Position
complement(98305..99303)
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AA seq
332 aa
AA seq
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MNKPKRPTLQDIATHLGITKMTVSRYLRNPNTVAKETGEKIATAIEQFGYIPNRAPDILS
NAKSRAIGVLVPSLTNQVFADVIKGIEQITDKAGYQTMLAHYGYSEEKEEQRIESLLSYN
IDGIILSENHHTPRTLKMLEVANIPVIEIMESGEGGIQQAVGFDNISAAQAMVETMISRG
CRQVVYFGARMDKRSKLKMQGYEQAMRKHGLTPNSITTEQHSSFTLGAAQLKQALQQFPQ
IDGIFCTNDDLAIGALFECQRLGIAVPTQIKIAGFHGHDVGQSLTPQLASVITPRLAIGR
TAAQELLDRIHGIPQQSAIINLGYQIHLGESI
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaccaaaacgcccaacgctacaagatattgcgacacatctcggcattaccaaa
atgacggtgagccgctatctacgtaatcccaacacagttgctaaagaaaccggtgaaaaa
atcgctaccgccattgagcaatttggttatatcccaaaccgtgcgccagatattctctct
aatgccaaaagccgtgctattggggtgttagtgccttcgctgactaaccaagtttttgct
gatgtgattaaagggattgagcaaattaccgataaagcaggttatcagacgatgcttgct
cactatgggtatagtgaagagaaggaagaacagcggattgaatcactgctttcttacaac
attgacgggattattttgtcggaaaaccatcatacgcctcgtacactgaaaatgttggaa
gtggcaaacattcctgtgattgaaattatggaaagcggtgaaggcggtattcaacaagcg
gtaggttttgacaacatttctgctgcacaagcaatggtagagacgatgatcagtcgtggt
tgtcggcaggtggtctatttcggggcgagaatggataaacgttctaaactgaaaatgcaa
gggtatgagcaagcgatgcgaaaacacggcttaacccctaatagcattaccacagaacag
cactcttctttcacgctgggggcagctcaacttaaacaagcgttacaacaatttccgcaa
atagatggcattttttgcaccaatgacgatttggcaatcggggcattatttgagtgccaa
cgcttaggcattgccgtgccaacacagataaagattgcgggctttcacgggcacgatgta
gggcaatcgcttacgccacaactagccagtgtgattactcctcgtttggcaattggtaga
actgcggctcaagaattattagatcgtattcatggtatcccacagcaaagtgccattatc
aatctgggttatcaaattcatttaggggagagcatctag
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