Bordetella trematum: SAMEA390648700026
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Entry
SAMEA390648700026 CDS
T04322
Symbol
uvrD_1
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
btrm
Bordetella trematum
Pathway
btrm03420
Nucleotide excision repair
btrm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA390648700026 (uvrD_1)
03430 Mismatch repair
SAMEA390648700026 (uvrD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btrm03400
]
SAMEA390648700026 (uvrD_1)
Enzymes [BR:
btrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA390648700026 (uvrD_1)
DNA repair and recombination proteins [BR:
btrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA390648700026 (uvrD_1)
MMR (mismatch excision repair)
Other MMR factors
SAMEA390648700026 (uvrD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
NACHT
HHH
Motif
Other DBs
NCBI-ProteinID:
SAI65988
UniProt:
A0A157Q768
LinkDB
All DBs
Position
1:complement(34549..36618)
Genome browser
AA seq
689 aa
AA seq
DB search
MNSPGPDTTDPLDELNPQQRDAATHGIAPGGQPAGALLVIAGAGSGKTSTLAHRVAQLIR
HGADPQRLLLLTFSRRAALEMDRRAGAVLKRVMGLSTQAPSLPWAGTFHSIGARLLRDCA
TRIGLAESFTVHDRSDAEDLMGLLRHELGLSATQSRFPLKGTCLAIYSRVVNSEAPLADI
LAQAFPWCAQWEAELKRLFQAYMQAKQAQHILDYDDLLLYWAEMMAEPTLARELSARFDH
VLVDEYQDTNLLQARILQGLKPDGRGLTVVGDDAQSIYGFRAATVRNILDFPSRFGAHVI
TLERNYRSTQPILEASNAVIALAQERYVKALWTDRAGRHKPEMVNVSDEAGQARWVADQV
LARREEGMRLTAQAALFRTGSHSAALELELARRQIPFVKFGGLRFLEAAHIKDVLSVLRW
ADNPRSRLAGFRVAQLLPGVGPATAARLMDAMAEAPDPQACLAGFRKSPPWQALAQLFGA
LRSGQARWPADLELALQWYAPWLEERYDDARARQADLQQLARLAGGYPSRERFLTELTLD
PPSATSAESGKPLLDEDYMILSTIHSAKGQEWRAVYLLNAVDGCLPSDMATGRSDDIEEE
RRLLYVAMTRARERLQIIVPQRFYVSTQAGMGDRHVYAARSRFLPDGLMPLFEHLPKPPP
LPHGRAAPAEGGVPPAPIDVGGRLRRLFS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaattccccaggccccgacacgaccgatccgcttgacgaactgaacccccagcagcgc
gacgccgccacccatggcatcgcccccggcggccaacccgccggcgcactgctggtgatc
gctggtgcaggctcgggcaagaccagcacgctggctcaccgcgtggcgcagctcatccgc
catggcgcggatccgcagcgcctgctgctgctgaccttctcgcgccgcgccgccctcgaa
atggatcgccgggcgggcgcggtgctcaaacgggtcatgggcctgagcacgcaagccccg
tcgctgccgtgggcaggcaccttccacagcattggcgcacgcctgttgcgcgattgcgcc
acgcgcatcgggctggccgagtctttcacggtgcacgatcgcagcgatgccgaagacctg
atggggctgttgcgccacgagctcggcctgagcgccacgcaaagccggtttccgctcaag
ggtacctgtctggcgatctactcgcgcgtggtcaacagcgaagcgccgctggccgacata
ctggcgcaggcctttccatggtgcgcgcaatgggaggccgagctcaagcgcctgttccag
gcctatatgcaggccaaacaggcccagcacatcctggattacgacgacctgttgctgtat
tgggccgagatgatggccgagccgacgctcgcccgcgagttgtcggcgcgctttgatcat
gtgctggtcgacgaataccaggacaccaatctgctgcaggcccgcatcctgcaggggctc
aagcccgatggccgcggcctgaccgtggtgggcgacgatgcacaatcgatctacggtttt
cgcgctgccaccgtgcgcaacatcctggattttccgtcccgtttcggtgcccatgtgatc
acgctggagcgcaactatcgcagcacccagccgattctggaggcgtccaacgctgtcatt
gccctggcccaggagcgctacgtcaaggccctgtggaccgatcgcgccggccgccacaag
cccgagatggtcaatgtcagcgacgaggcgggccaggcgcgctgggtggccgatcaggtc
ctggcgcgccgcgaggagggcatgcgcctgaccgcgcaggcggcgctgtttcgtaccggc
agccacagtgcggcgctcgaactggagctggcacggcgccagattcccttcgtcaagttt
ggcggcctgcgctttctcgaggccgcgcacatcaaggacgtgctgtctgttctgcgctgg
gccgacaatccgcgctcgcgcctggcgggcttccgggtggcgcaattgctgccgggtgtg
ggcccggccacggccgcccggctgatggacgccatggccgaggcgccggatccccaggcc
tgtctggccgggttcaggaaaagcccgccctggcaggcgctggcgcagctgttcggcgcc
ttgcgcagcggccaggcgcgctggcccgctgacctggagctggcgctgcagtggtatgcg
ccgtggctggaagagcgctacgacgacgcgcgcgcccgccaggccgatctccagcagctg
gcccggctggccggcggctatccgagccgcgaacgtttcctgaccgagttgacgctggat
ccaccctcggccaccagtgccgagtcgggcaagcccctgctcgacgaagactatatgatc
ctgtccaccattcattcggccaaaggccaggaatggcgcgccgtctacctgctcaatgcg
gtggatggttgcctgccttcggacatggcgacgggccgcagcgacgacatcgaagaagag
cgccgtctgctctacgtcgccatgacgcgcgcccgggaacgcttgcagatcatcgtgccg
caacgcttttacgtcagcacccaggccggcatgggtgaccgccatgtctacgcggcgcgc
agccgctttctgcccgacgggttgatgcccctgttcgagcatctgcccaaaccgccgccg
ctgccccatggccgggccgctccggccgaggggggcgtgccgcctgcgccgatcgacgtc
ggcgggaggctacggcggctgttctcctga
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