Bordetella trematum: SAMEA390648700254
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Entry
SAMEA390648700254 CDS
T04322
Symbol
radB
Name
(GenBank) DNA repair protein
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
btrm
Bordetella trematum
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btrm03400
]
SAMEA390648700254 (radB)
DNA repair and recombination proteins [BR:
btrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SAMEA390648700254 (radB)
TLS (translesion DNA synthesis) factors
Other SOS response factors
SAMEA390648700254 (radB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
AAA_22
AAA_15
ABC_tran
RsgA_GTPase
Bap31_Bap29_C
Motif
Other DBs
NCBI-ProteinID:
SAI66427
UniProt:
A0A157PW52
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All DBs
Position
1:257584..259239
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AA seq
551 aa
AA seq
DB search
MLRTLHIRDFVIVEQTEIHFGAGFTVFTGETGAGKSILIDALALTLGERGDAGMLREGAT
RADITAIFDTPPHLQAWLAERELEPCEELSLRRVIDAQGRSRAFINGLPATVTQLRELGE
SLVDIHGQHAHQSLMRPDAQRDLLDAHGGHQALRQNVAQAWKAWRTLARQLETSEQDAES
LAAERERLQWQVDELQRLNLAPGEWETLQADHSRLSHAQSLLDDASQILDALDGEHDSAL
SRLNAAGHRLQQMQRHDGSGLKTIAEELESARIAMSEAVSDLNNYLSRIELEPERLNAAE
ARLSAVFETARKFRCDAEQLPELQHSLTEQLAQLQAAGDIEALREQTRQAQERYDAAARA
LSQARRKIARDLSEQVTRAMQTLSMSGGRFEAAVNEGAASAQGSDNVEFLVAGHAGSTAR
ALGKVASGGELSRISLALSVIASRAARVPTLIFDEVDSGVGGAVAEVVGKLLRELGARHQ
VLCVTHLPQVAACGNHQFRVSKHESGGVTRSHITPLDESERIEEVARMLGGITITSTTRD
HAREMLQGLDA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgaaccctgcatatccgtgatttcgtcatcgtcgaacagactgaaatccatttc
ggcgccggtttcaccgtcttcaccggtgaaaccggcgcgggcaagtccatcctgatcgac
gcgctggcgctcaccctgggtgagcgcggcgacgccggcatgctgcgcgaaggcgccacg
cgggccgacatcaccgcgatcttcgacaccccgccccatctgcaagcctggctcgccgag
cgcgaactcgaaccctgcgaagagctgtcgctgcgccgcgtcatcgacgcccagggccgc
agccgtgccttcatcaacggcctgccggccaccgtcacgcagttgcgcgagctgggcgag
tcgctggtcgacatccacggccagcatgcccaccagagcctgatgcgacccgatgcgcag
cgcgacctgctcgacgcccacggcggccaccaggcattgcgccagaacgtggcgcaggcc
tggaaggcctggcgtaccctggcccgccagctcgaaacctcagaacaggacgcagaaagc
ctggccgccgagcgcgaacgcctgcaatggcaggtcgacgaactgcagcgcctgaatctc
gcgccaggcgagtgggaaaccctgcaggccgaccacagccggctctcgcacgcccagtcc
ctgctcgatgacgccagccagattctcgacgccctggacggcgaacacgactccgcgctc
tcacggctgaatgccgccgggcaccgcctgcagcaaatgcagcgccacgatggcagcggg
ctcaagaccatcgccgaagaactggagtcggcccgcatcgccatgagcgaggcggtctcc
gacctgaacaactacctgagccgcatcgagctcgaacccgagcgcctgaatgccgcagaa
gcgcgcctgagcgcggttttcgagacagcgcgcaagttccgttgcgatgccgagcaactg
cccgaactgcaacactctctgaccgaacagctggcccagctgcaggctgccggcgacatc
gaagcgttgcgcgagcaaacccgccaggcccaggaacgctacgacgcggccgcccgggcc
ctgagccaggcccgccgcaagatcgcccgcgacctgagcgagcaggtcacccgggccatg
cagaccctgtccatgagcggcgggcgcttcgaggcggccgtcaatgaaggcgccgccagc
gcccagggcagcgacaacgtcgagttcctggtggccgggcatgccggatcgaccgcgcgc
gccttgggcaaggtggcctcgggcggcgagctgtcgcgcatttctctggccctgtcggtg
attgccagccgcgctgcgcgcgtgcccaccctgatcttcgacgaagtcgacagcggcgtg
ggcggggccgtggccgaggtggtcggcaagctgctgcgcgagctcggcgcccgccatcag
gtgttgtgcgtgacccacctgccccaggtggccgcctgcggcaatcaccagttccgcgtc
agcaagcacgaaagcggcggcgtgacccgctcgcatatcaccccgctcgacgaatccgaa
cgcatcgaggaagtcgcccgcatgctgggcggcatcaccatcacctcgaccacgcgcgac
catgcgcgcgaaatgctgcaagggctggacgcataa
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integrated database retrieval system
