Bordetella trematum: SAMEA390648700318
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Entry
SAMEA390648700318 CDS
T04322
Symbol
polC_2
Name
(GenBank) DNA polymerase III polC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
btrm
Bordetella trematum
Pathway
btrm03030
DNA replication
btrm03430
Mismatch repair
btrm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA390648700318 (polC_2)
03430 Mismatch repair
SAMEA390648700318 (polC_2)
03440 Homologous recombination
SAMEA390648700318 (polC_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btrm03032
]
SAMEA390648700318 (polC_2)
03400 DNA repair and recombination proteins [BR:
btrm03400
]
SAMEA390648700318 (polC_2)
Enzymes [BR:
btrm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA390648700318 (polC_2)
DNA replication proteins [BR:
btrm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMEA390648700318 (polC_2)
DNA repair and recombination proteins [BR:
btrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMEA390648700318 (polC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
SAI66557
UniProt:
A0A157KXQ7
LinkDB
All DBs
Position
1:complement(310611..311486)
Genome browser
AA seq
291 aa
AA seq
DB search
MPSFVAIDVETANPNMASICQIGIATFRGGEKVDEWLSLVDPADYFDPVNTRIHGITESA
VRGAPSFQSLMAEVRGRLDGAVVVSHTGFDRTALSRAFAISGGVVGDCVWLDSAQVARRA
WPAVSRKGYGLANVAHMLGITFRHHNALADAATAGIILVRAIEESGKPLEWWLRRVKRRL
PQADGSYIASVAQEGNEDGHLAGEVVVFTGQLSMSRQEAASRAAKAGCDVATGVTKKTTI
LVVGDQDIAKLGGKDKSAKHIKAETLIGQGAELRILGESDFLALLESAMDD
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgccaagctttgtcgcgattgatgtggaaacagctaacccaaatatggcgagcatttgc
cagatcgggattgcaacgtttcggggcggggagaaagtcgatgaatggctgtcgctggta
gacccggcggactacttcgatccagttaatacgcgtattcacggaattacagaatcagca
gttcgtggggcgccgtcgtttcaatctctcatggccgaggtaaggggtcgcttagatggt
gcggtggtggtgtcacacacaggtttcgaccgcacagccttgagcagagccttcgctatc
tcgggcggagtcgtaggtgattgtgtttggcttgattcggcgcaagttgctcggagggcg
tggcctgcggtatcacggaagggctatggtctcgctaacgtcgcccacatgctggggatc
acgtttcgacaccataacgcgctcgccgacgctgctacagcggggatcattctagttagg
gcgattgaagagagtggtaagccgctggagtggtggctgcgccgagtgaagcgtaggctg
ccgcaggcggatgggtcatacattgcttctgtagcgcaggaaggcaatgaggatggccac
ctggcgggtgaggtggtcgtgttcacagggcagctgtcgatgtcaaggcaggaggctgcc
agccgggcagccaaggctggatgtgacgttgcgactggcgttaccaagaaaactactatc
ctggttgtcggggatcaggacattgccaagctcggcgggaaggataaaagcgccaaacat
atcaaggccgagacgctgattggccaaggggcggagttgcgaattcttggcgaaagcgac
tttctggcgctgctagagtcagctatggatgattga
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integrated database retrieval system
