Bordetella trematum: SAMEA390648700363
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Entry
SAMEA390648700363 CDS
T04322
Symbol
ruvC
Name
(GenBank) Holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
btrm
Bordetella trematum
Pathway
btrm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SAMEA390648700363 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btrm03400
]
SAMEA390648700363 (ruvC)
Enzymes [BR:
btrm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
SAMEA390648700363 (ruvC)
DNA repair and recombination proteins [BR:
btrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAMEA390648700363 (ruvC)
RecFOR pathway proteins
SAMEA390648700363 (ruvC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
RelB_transactiv
Motif
Other DBs
NCBI-ProteinID:
SAI66644
UniProt:
A0A157L009
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All DBs
Position
1:349260..349805
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AA seq
181 aa
AA seq
DB search
MRVLGVDPGLRRTGFGVVDVDGMHLRYVASGTIVVPPDLGLAQRLRVILDNLREVARETR
PDVAALEIVFLNTNPASTLLLGQARGAALCALADSGLLVHEYTALQIKKAVVGTGRAAKE
QVQTMVRHLLSLDGTPAPDSADALACAICHAHIGPLQDRLAAVSSGASSGKARLRRGRLL
G
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtcctcggcgtcgaccccggcctgcgccgcaccggcttcggtgtggtcgacgtc
gatggcatgcacctgcgctatgtcgccagcggcacgattgtggtgccgccggatctcggc
ctggcgcagcgtctgcgcgtcattctcgacaatctgcgcgaggtggcgcgcgagacgcgg
cccgatgtggccgcgctcgagatcgtctttctgaacaccaacccggcctcgaccctgctg
ctcgggcaggcgcgcggcgcggcgctgtgcgcgctggccgacagcggtctgctggtgcac
gagtacaccgcgctgcagatcaagaaggccgtggtcggcaccggccgggccgccaaggaa
caggtccagaccatggtgcgccacctgctgtcgctggatggcacccccgcccccgactcc
gccgacgccctggcctgcgccatctgccatgcccacatcggaccgttgcaggatcgcctg
gccgccgtgtcttcgggcgcaagcagcggcaaggcccggctgcgccgcggccgccttctc
ggctga
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