Bordetella trematum: SAMEA390648700547
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Entry
SAMEA390648700547 CDS
T04322
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
btrm
Bordetella trematum
Pathway
btrm00470
D-Amino acid metabolism
btrm00550
Peptidoglycan biosynthesis
btrm01100
Metabolic pathways
btrm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAMEA390648700547 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAMEA390648700547 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SAMEA390648700547 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
btrm01011
]
SAMEA390648700547 (ddl)
Enzymes [BR:
btrm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SAMEA390648700547 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
btrm01011
]
Precursor biosynthesis
Amino acid ligase
SAMEA390648700547 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
TTL
ATPgrasp_ST
CPSase_L_D2
RimK
ATPgrasp_YheCD
GARS_A
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
SAI67022
UniProt:
A0A157P6Z8
LinkDB
All DBs
Position
1:complement(582239..583192)
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AA seq
317 aa
AA seq
DB search
MTQKFGKVGVLYGGRSAEREVSLMSGAGVHEALLSAGVDAHLFDTGTQSLAQLEAEGFER
VFLALHGRYGEDGSLQGALELLDIPYTGSGVTASALAMDKILTKRVWLQQGLPTPAFEAL
EGPQGLRETAERLGLPLILKPPHEGSTVGVTKVTEFSALEQAYADAAVFDDAVLAEQFVR
GRELTVAVLGSGRAARALPVIEIVAPDGNYDYQNKYFTDVTQYHCPADLPPGVAAKTEAI
AVQAYRALGCEGWGRADFMLDENHQPWLLEMNTSPGMTSHSLVPMAARAVGMSYAELCVA
ILAEASCKLRAPARANG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagaagtttggcaaggtcggggtgctttacggcggccgttccgccgagcgcgaa
gtgtcgctgatgtccggcgcgggggtgcacgaagccctgttgagcgccggtgtggacgcg
catctgttcgataccggcacgcaaagcctcgcccagctggaggccgaagggttcgagcgg
gtattcctggcgctgcatggccgctatggtgaagacggcagcctgcagggcgcgctcgaa
ctgctcgacattccctataccggcagcggcgtgaccgcttcggccctggcgatggacaag
attctcaccaagcgggtctggttgcagcaaggtctgcccacgccggcttttgaggccctc
gaggggccgcagggcctgcgcgaaaccgctgagcgcctcggcctgccgctgattctcaag
ccgccgcacgaagggtcgaccgtcggcgtgaccaaagtgaccgagttttccgcgctggag
caggcctacgccgacgccgccgtgttcgatgacgccgtgctggccgagcaattcgtgcgc
ggccgggagctgacggtggccgtgctgggcagcgggcgcgcggcgcgcgccctgccggtg
atcgagatcgtggcgcctgacggcaattacgactaccagaacaagtatttcaccgatgtg
acccaataccattgcccggccgatctgccgccgggcgtggcggccaagaccgaagcgatc
gccgtccaggcctatcgtgccctgggttgcgaaggctgggggcgcgccgacttcatgctc
gatgaaaaccaccagccctggttgctggaaatgaacacctcgcccggcatgaccagccat
tcgctggtgccgatggcggcccgtgcggtcggcatgagttacgcagagctgtgcgtggcc
atcctggccgaggccagttgcaagctgcgcgcaccggcgcgcgccaatggatag
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