Bordetella trematum: SAMEA390648700693
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Entry
SAMEA390648700693 CDS
T04322
Symbol
glyA_1
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
btrm
Bordetella trematum
Pathway
btrm00260
Glycine, serine and threonine metabolism
btrm00460
Cyanoamino acid metabolism
btrm00630
Glyoxylate and dicarboxylate metabolism
btrm00670
One carbon pool by folate
btrm00680
Methane metabolism
btrm01100
Metabolic pathways
btrm01110
Biosynthesis of secondary metabolites
btrm01120
Microbial metabolism in diverse environments
btrm01200
Carbon metabolism
btrm01230
Biosynthesis of amino acids
btrm01240
Biosynthesis of cofactors
btrm04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SAMEA390648700693 (glyA_1)
09102 Energy metabolism
00680 Methane metabolism
SAMEA390648700693 (glyA_1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAMEA390648700693 (glyA_1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SAMEA390648700693 (glyA_1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SAMEA390648700693 (glyA_1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SAMEA390648700693 (glyA_1)
Enzymes [BR:
btrm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SAMEA390648700693 (glyA_1)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
SAI67325
UniProt:
A0A157SA74
LinkDB
All DBs
Position
1:complement(737959..739209)
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AA seq
416 aa
AA seq
DB search
MFDRKLTLDKVDPDLWAAIQQEDVRQEQHIELIASENYASPAVMQAQGTQLTNKYAEGYP
GKRYYGGCEYVDIIEQLAIDRLKAVFGAEAANVQPNSGSQANQGVYMAVLKPGDTVLGMS
LAEGGHLTHGASVNASGKLYNFIPYGLDANEVLDYEQVEALAKEHKPKLIVAGASAYSLH
IDFERMARIAHDNGALFMVDIAHYAGLVAGGQYPNPVPHADFVTSTTHKSLRGPRGGVIM
MKAEFEKAVNSAIFPGIQGGPLEHVIAAKAVAFKEALEPEFKEYAAQVVKNAKVMADTLV
KRGLRIVSGRTESHVMLVDLRAMGITGKEAEAVLGQAHITVNKNAIPNDPEKPFVTSGIR
LGTPAMTTRGFKEAEAELTANLIADVLENPRDEANIAAVRAKVNELTSRLPVYSAK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaccgcaagctcaccctcgacaaggtggatcccgacctttgggccgccatccag
caagaagatgtccgtcaagaacagcacatcgagctgatcgcttccgaaaactacgccagc
cccgccgtcatgcaggcgcaaggcacgcagttgaccaacaagtacgctgagggctatccc
ggcaagcgttactacggtggttgcgaatacgtcgacatcatcgagcagctcgcgatcgac
cgcctgaaggcggtgttcggcgccgaggccgccaacgtgcagcccaactccggttcgcag
gccaatcagggcgtgtacatggccgtcctgaagccgggcgacaccgtgctgggcatgagc
ctggccgaaggcggtcacctgacgcacggcgcgtcggtcaatgcttcgggcaagctgtac
aacttcattccctatggcctggatgccaacgaagtcctggactacgagcaggtcgaagcc
ctggccaaggaacacaagcccaagctgatcgtcgctggcgcctcggcctattccctgcac
atcgatttcgagcgcatggcccgtatcgcccacgacaacggcgcgctgttcatggtcgat
atcgcccactacgccggcctggtggccggtggccagtatcccaacccggtgccgcacgcc
gatttcgtcacctcgaccacgcacaagtcgctgcgcggtccgcgcggcggcgtcatcatg
atgaaggccgagttcgagaaggcggtcaactcggccatcttcccgggcattcagggcggc
ccccttgagcacgtcatcgccgccaaggccgtggccttcaaggaagccctggagccggag
ttcaaggagtacgcggctcaggtcgtcaagaacgccaaggtgatggccgacacgctggtc
aagcgtggcctgcgcatcgtgtccggccgcaccgagagccacgtgatgctggtcgacctg
cgcgccatgggcatcaccggcaaggaagccgaggccgtgctgggccaggcccacatcacg
gtcaacaagaacgccattccgaatgatccggagaagcccttcgtgaccagcggcatccgt
ctgggcaccccggccatgacgacgcgcggcttcaaggaggccgaggccgaactgaccgcc
aacctgattgccgacgtgctggagaatccgcgcgacgaagccaacatcgccgccgtgcgc
gccaaggtgaacgagctgacctcgcgtctgcccgtctacagcgccaagtaa
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