Bordetella trematum: SAMEA390648701010
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Entry
SAMEA390648701010 CDS
T04322
Symbol
amiC_2
Name
(GenBank) substrate-binding periplasmic transport protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
btrm
Bordetella trematum
Pathway
btrm02010
ABC transporters
btrm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMEA390648701010 (amiC_2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA390648701010 (amiC_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
btrm02000
]
SAMEA390648701010 (amiC_2)
Transporters [BR:
btrm02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
SAMEA390648701010 (amiC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_5
Peripla_BP_6
NAMPT_N
Motif
Other DBs
NCBI-ProteinID:
SAI67954
UniProt:
A0A157SC75
LinkDB
All DBs
Position
1:complement(1074244..1075380)
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AA seq
378 aa
AA seq
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MTRDGYRVGLLFSHESLTAATEITQENATLMAIDEVNDAGGIDGVPLVPVSARLGAQPPD
YRQAAEWLCDSQRVPLIFGTHMSSTRKAVLPVVESRRALLCYATLYEGFEYSPNCFYAGS
VPNQNSVQLASYVIRHFGNRVLFIGGQYVYPRESNRIMRELYEQAGGEVVDEVYLPLNAP
QQDLRDVLARAVALRPDAIYSTMVGRDIVKLYRAYRELGLDPARMPIVSLATNETDVAAL
SAEQAEGHITAAPYFASLDSGTSRRFSRAYHARFGEDSPITAGAEAAYFQVHLVAEAARR
AGTLGLPELVGALAGASFEAPQGLVTVDGSTQHTSLWPRIARINARREFEVIYAAGAAVR
PVPYLVDHALDPQALVLP
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgacggttatcgggtcggcctgctgttctcgcatgagagcctcaccgccgcc
accgagatcacccaggaaaacgccacgctgatggcgattgacgaggtcaatgacgccggc
ggcatcgacggggtcccgctggtgccggtgagcgcgcgcctgggtgcccaaccgcccgac
taccgtcaggcggccgagtggctgtgcgacagccagcgggtgccgctgatctttggcacc
catatgtccagcacccgcaaggccgtgctgccggtggtcgagagccgtcgcgccctgttg
tgctatgcgaccctctacgaagggttcgagtactcgcccaactgcttttatgccggctcg
gtgcccaaccagaactcggtgcagctggccagctatgtgatccgtcatttcggcaaccgg
gtgctgttcatcggtggccagtatgtctatccgcgcgaatccaaccgcatcatgcgcgag
ctctacgagcaggccggcggcgaggtggtcgacgaggtctatctgccgctcaatgcgccg
cagcaggatctgcgggacgtgctcgcgcgcgccgtggcgctgcgcccggatgccatctac
tcgaccatggtggggcgcgacatcgtcaagctctatcgcgcctatcgcgagctgggtctg
gacccggcgcgcatgcccatcgtcagtctggcgaccaacgaaaccgacgtggcggcgctg
agcgccgagcaggccgaaggccatatcacggccgcgccttatttcgccagcctggacagc
ggcaccagccgacgtttttcccgcgcctatcatgcccgcttcggcgaggacagcccgatc
actgccggcgcggaggccgcctatttccaggtgcatctggtggccgaggccgcccggcgt
gccggcacactgggcctgccggagctggtcggcgcgctggccggcgccagtttcgaagcg
ccgcagggcctggtgacggtcgatggcagcacgcagcacacctcgctctggccgcgcatc
gcgcgcatcaatgcgcgccgcgagttcgaggtgatctacgccgccggcgccgccgtgcgg
cccgtgccgtatctggtggatcacgcgctggatccccaggcgctggtgttgccgtga
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