Bordetella trematum: SAMEA390648701039
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Entry
SAMEA390648701039 CDS
T04322
Symbol
fam
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
btrm
Bordetella trematum
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btrm03021
]
SAMEA390648701039 (fam)
Transcription machinery [BR:
btrm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAMEA390648701039 (fam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_PafC
Sigma70_ECF
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
SAI67995
UniProt:
A0A157MI18
LinkDB
All DBs
Position
1:complement(1107046..1107930)
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AA seq
294 aa
AA seq
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MNPASSSLIPSGNTLALAVANPGALGTIDAYISTVNRLPMLSPEQESTLARRLRDEGDLE
AAREMVLSHLRLVVSVARQYLGYGLPHADLIQEGNVGLMKAVKRFDPERGVRLVSFAVHW
IKAEIHEYIIRNWRLVKVATTKAQRKLFFNLRSMRPDGQTLDTEQVDHIARELNVRTEDV
SEMEVRMSGRDLSLENQDDDDDGYAPIAYLSDECREEPTRVLERKARETLQSEGLTDAIQ
GLDPRSRRIVEARWLQDDGGSTLHELAAEFGVSAERIRQIEAAALKKMRSALSA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgccagctcttcgttgatcccttcgggcaacaccctggccctggcggttgcc
aatccgggtgcgctgggcacgatcgacgcctacatctcgacggtcaaccgcctgccgatg
ctgtcgcccgagcaggaatccacgttggcgcgccgtttgcgcgatgaaggcgatctggaa
gccgctcgcgaaatggtgctgtcgcacctgcggctggtggtttccgtggcgcgccagtac
ctgggctatggcctgccgcatgccgacctgatccaggaaggcaacgtcggtctcatgaaa
gccgtcaagcgatttgacccggagcgtggtgtgcgcctggtgtcgttcgccgtgcattgg
atcaaggccgagatccacgagtacatcatccgcaactggcgtctggtcaaggtggcgacc
accaaggcccagcgcaagctgtttttcaatctgcgcagcatgcgtccggacgggcagacc
ctggacaccgaacaggtggaccacatcgcccgcgaactcaatgtgcgcaccgaagacgtc
agcgaaatggaagtccggatgtccggacgcgacctgtcgctggagaaccaggacgatgac
gatgacggctatgcgccgatcgcctatctgtccgacgagtgccgggaagaacccacccgt
gtgcttgaacgcaaagcacgtgaaaccctgcaaagcgagggcctgaccgatgccatccag
ggcctcgatccccgttcgcgccgcatcgtcgaagcccgttggctgcaagacgacggcggc
agcaccctgcatgaactggccgccgagttcggcgtgtcggccgagcgcatccgccagatc
gaggcggcggcgctgaaaaagatgcgcagcgccctgtcggcctga
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