Bordetella trematum: SAMEA390648701124
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Entry
SAMEA390648701124 CDS
T04322
Symbol
cytR
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
btrm
Bordetella trematum
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
btrm03000
]
SAMEA390648701124 (cytR)
Transcription factors [BR:
btrm03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SAMEA390648701124 (cytR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Peripla_BP_6
TetR_N
HTH_24
HTH_AsnC-type
HTH_IclR
HTH_6
MarR
Acetyltransf_19
HTH_Tnp_ISL3
HTH_3
Motif
Other DBs
NCBI-ProteinID:
SAI68178
UniProt:
A0A157MNV8
LinkDB
All DBs
Position
1:1192954..1193997
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AA seq
347 aa
AA seq
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MKSKVDHPIRLSIVEIARKAGVSSATVSRAFNRPELLKTSTLAHVEKIAGEHGFRPNRVG
RSLRQGSTRTLGLLLPTLKNPVFADCFEGACRQAQHAGYSVMVATSNYSPRDEMSGLKAL
IDHQVDGLILTLGAAITGTLQRLLQDSGVPYILVYSAIEGVPSVGIDDHRAGQDLIDLLV
GLGHRRIAFASGPLRSSDRAVRRLLGARQAAQRHGLPELGHLLMREHTHADARVVKQALQ
AGSPPSALICSNDMLALSLIARCRQLGLRVPRDVSVCGVDGITFGTMSDPPLTTVVQPSE
EIGRSACQSLLMHLRDQRGMHSTRVAHHISPGGTVRPLSPPDSGGFP
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtcgaaggtcgatcatcccatccgtttatccattgtcgaaatcgcacgcaaggcc
ggcgtctccagcgccacggtgtcacgtgcattcaaccgccccgaattactcaaaaccagc
acgcttgcccatgtcgagaaaatcgcaggcgagcatggctttcgacccaatcgcgtcgga
cgcagtctgcgccagggttcgacccgtaccctcgggctgctgctgcccacgctgaagaat
cccgtgtttgccgattgttttgaaggcgcctgccgccaggcccagcatgccggctacagc
gtcatggtcgccaccagcaactattccccgcgtgatgagatgtcgggcctgaaggccctg
atcgaccatcaggtcgacggtctcatcctgaccctgggcgcggccatcaccggcaccctg
caacgcttgctgcaggatagcggcgtgccctacatcctggtctacagcgccatcgagggc
gtgccctcggtcggcatcgacgatcatcgcgccggccaggatctcatcgatctgctggtc
ggcctgggccaccgccgcatcgccttcgcctcggggccgctgcgcagctcggaccgcgcc
gtgcgccgtctgctgggcgcgcgccaggccgcgcaacgccacggcctgcccgaactcggt
cacctgctgatgcgggagcatacccacgcggacgcccgtgtcgtgaaacaggccctgcag
gcgggctcgccgcccagcgccctgatctgctccaacgacatgctggcgctctcgctgatc
gcgcgttgccgccagctgggcctgcgcgtgccacgcgatgtctcggtctgcggggtcgat
ggcatcaccttcggcaccatgtccgacccaccgctgaccaccgtcgtacagcccagcgag
gagatcggccgcagcgcctgtcagtccctgctgatgcatctacgcgatcagcgcggcatg
cactccacgcgggtcgcgcaccacatttccccaggcggcaccgtccgcccgctctctccc
cctgactccggaggattcccatga
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