Bordetella trematum: SAMEA390648701208
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Entry
SAMEA390648701208 CDS
T04322
Symbol
bepD
Name
(GenBank) HlyD family secretion protein
KO
K18306
membrane fusion protein, multidrug efflux system
Organism
btrm
Bordetella trematum
Pathway
btrm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA390648701208 (bepD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
btrm02000
]
SAMEA390648701208 (bepD)
Transporters [BR:
btrm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SAMEA390648701208 (bepD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
SAI68354
UniProt:
A0A157MTA0
LinkDB
All DBs
Position
1:complement(1287376..1288488)
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AA seq
370 aa
AA seq
DB search
MSNKKKWAVVTAVVIAGAIASGVWLLRDSAAQDGGAWPNPKVALSSVVRGQAPRTLHGVG
ELEAARQVALASEVAGRIVRIAFDSGQPVRRGDLLVQINDAPEQAERLRLRAQLRNAETT
LARTRKLLAEKVATQEQWENAVAARDMAAGELRRIEAVIDQKALRAPFDGVAGIRRVHEG
QYLQPGEAIVSLIDTQGLKVNFSLDELAAPHLHVGQPVQLRLDAWPQEVFPATLSAIDPW
VGKARTLQVQARLDAADPRLRAGMFANVQVKPPQPVSVLTVPETAVTYTAYGQTVFVART
EGDQPPTVHRVAVKTGERWQGLVEILQGLNEGDRVVVSGQIKLSDGMPIDVAARDVLHEA
PAGAAQEQAS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaagaaaaaatgggcggtcgtcacggccgtcgtgatcgccggcgccattgcc
tcgggggtttggctgttgcgcgacagcgccgcccaggacggcggcgcctggcccaatccc
aaggtggcgctgtcttccgtcgtgcgcggtcaggcgccgcgcacgttgcacggggtgggt
gagctggaggccgcccgtcaggtggcgctggcctccgaagtggctgggcgcattgtccgt
atcgcctttgattcgggccagcccgtcaggcgcggagacctgctggtgcagatcaatgac
gcgcctgaacaggccgaacgcttgcgcctgcgggctcagcttcgcaacgcggaaaccacg
ctggcgcgcacgcgcaagttgctggccgagaaagtggccacgcaggaacagtgggagaac
gcggtcgcggcgcgcgacatggccgccggcgagctgcgtcgcatcgaggcggtgatcgac
cagaaggcgctgcgcgcgccctttgatggcgtggcaggcatacgccgcgtgcatgaaggg
caatacctgcagcccggcgaggccatcgtgagcctgatcgacacgcagggcttgaaggtg
aatttctcgctcgatgagctggcggcaccgcatctgcatgtgggccagccggtgcagttg
cgtctggatgcctggccgcaggaggttttcccggccaccctgagcgccatcgatccgtgg
gtgggcaaggcgcgcacgctgcaggtacaggcgcgtctggatgcggccgatccccgtctg
cgagccggcatgttcgccaatgtccaggtcaagccgccgcaaccggtgtcggtactgacg
gtgccagaaaccgcagtgacctacaccgcgtatgggcagaccgtctttgtggcgcgtacc
gagggcgatcagccgcctaccgtgcatcgcgtggcggtcaagacgggcgagcgctggcaa
ggcctggtggaaatcctgcagggcctgaacgaaggcgaccgcgtggtggtgtcggggcag
atcaagctcagcgatggcatgcctatcgatgtggccgcgcgcgatgtcctgcatgaggcg
ccggccggtgcggctcaggagcaggcatcatga
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