Bordetella trematum: SAMEA390648701361
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Entry
SAMEA390648701361 CDS
T04322
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4%2C6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
btrm
Bordetella trematum
Pathway
btrm00521
Streptomycin biosynthesis
btrm00523
Polyketide sugar unit biosynthesis
btrm00525
Acarbose and validamycin biosynthesis
btrm00541
Biosynthesis of various nucleotide sugars
btrm01100
Metabolic pathways
btrm01110
Biosynthesis of secondary metabolites
btrm01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SAMEA390648701361 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SAMEA390648701361 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
SAMEA390648701361 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SAMEA390648701361 (rfbB)
00525 Acarbose and validamycin biosynthesis
SAMEA390648701361 (rfbB)
Enzymes [BR:
btrm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SAMEA390648701361 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
SAI68628
UniProt:
A0A157RI57
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All DBs
Position
1:1447391..1448446
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AA seq
351 aa
AA seq
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MNILITGGAGFIGSALVRHLIRDTSHRVVNVDKLTYAGNLASLAECAADPRHVLEPIDIC
DAAALQDVFARHRPDAVIHLAAESHVDRSIDNPQAFIQTNLVGSYTVLETARAYWAALPQ
QAQAAFRLLQVSTDEVFGDLGEQPGCFHETSPYAPSSPYAASKAGADHLARAWHRTYGLP
VLLSHAGNNYGPCQFPEKLIPLSLLSALRGQPITLYGAGDQVRDWLYVEDHARALYLLLR
QGRPGQHYNVGGNAPLRNLDVVEQLCDILQRLRPAASGQYRALITHVPDRPGHDRRYALD
TAKLAGELGWRAAEDFASGLEKTVRWYLAHPQWVADVESGAYRARWLGAAP
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcctgatcactggcggcgccggctttatcggttcggccctggtgcgccacctc
atccgcgacacctcgcatcgcgtggtcaacgtcgacaaactgacctacgccggcaacctg
gcttccctggccgagtgtgccgcggatccgcgccatgtcctggaaccgatcgatatctgc
gatgccgccgctttgcaggacgttttcgcacgccaccgccctgacgcggtcatccacctg
gcggccgagtcgcatgtggatcgctcgatcgacaacccgcaggccttcattcagaccaat
ctggtcggcagctataccgtgctggaaaccgcgcgcgcctattgggccgcattgccgcag
caggcccaggcggctttccgcctgttgcaggtctcgaccgacgaggtgttcggcgacctg
ggcgagcagcccgggtgtttccacgaaaccagcccctacgcgcccagttcgccatacgcc
gccagcaaggccggcgccgatcatctggcgcgcgcctggcatcgcacctatggcctgccg
gtcttgctcagccatgcgggcaacaactacggtccctgtcagtttcccgagaagctgatt
ccgctgtcattgctgtcggcgttgcgcggccaacccatcacgctgtatggcgcgggcgat
caggtgcgtgactggctctacgtggaagaccacgcccgggccttgtatctcctgctgcgg
caaggccggcctggccagcactacaacgtgggtggcaatgcgccgctgcgcaatctggac
gtggtggagcagctgtgcgacatcctgcagcgtctgcggccggccgcaagcgggcagtac
cgtgcgctcatcactcacgtgccggatcgccccgggcatgaccgccgttatgcgctggac
accgccaagctggccggcgaactgggctggcgtgccgccgaggacttcgccagcgggctg
gagaaaaccgtgcgctggtatctggcgcatccgcagtgggtggccgatgtggaaagcggc
gcctatcgagcccgctggctgggggcggccccatga
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