Bordetella trematum: SAMEA390648701416
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Entry
SAMEA390648701416 CDS
T04322
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
btrm
Bordetella trematum
Pathway
btrm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA390648701416 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btrm03400
]
SAMEA390648701416 (ung)
Enzymes [BR:
btrm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SAMEA390648701416 (ung)
DNA repair and recombination proteins [BR:
btrm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAMEA390648701416 (ung)
Prokaryotic type
SAMEA390648701416 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
SAI68683
UniProt:
A0A157RTG1
LinkDB
All DBs
Position
1:complement(1496197..1496955)
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AA seq
252 aa
AA seq
DB search
MTPDNRLLPDTLAAQSAALPPAWAPALREPAVSEALQRVIAHVEARLAAGAVVYPATPFR
ALDSLSPAQVRVVILGQDPYHGPGQAQGLAFSVPDGCKCPPSLRNMFKEIGRDHPLTGQP
GHDLSSWVEQGVLLLNTSLTVEDGQAGSHAKRGWETVTDALFRCVAADPAPKAFLLWGAH
AQAKAALLAADHPHLVLCANHPSPLSASRPPVPFLGCGHFTQVNAWLQSRGQTPIDWTSS
FKKIPQQGEFAL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccgacaaccgcctgctccccgacacactggccgcccagagcgccgccctgccc
ccggcctgggcccctgccctgcgcgagccggccgtcagcgaggcgctgcaacgcgtcatc
gcccatgtcgaggcccgcctggccgccggcgccgtggtttatccggccacgccctttcgt
gcgctcgacagcctgtcgccggcacaggtccgcgtggtcatcctgggccaggatccctac
cacggcccaggccaggcgcagggcctggctttctcggtgcccgatggctgcaagtgcccg
cccagcctgcgcaacatgttcaaggaaatcggccgcgaccatcccctgaccgggcagccc
ggacacgacctgagctcctgggtcgagcagggcgtgctgctgctcaatacctcgctcacg
gtcgaagacggccaggccggctcgcatgccaagcgcggctgggaaaccgtcaccgatgcg
ctctttcgctgcgtggcggcagatcccgcacccaaggcctttcttctctggggcgcccac
gcgcaggccaaggcggccctgctggcagccgatcatccgcatctggtgctctgcgccaac
catccctcgcccctgtcggccagccgcccgcccgtgcctttcctgggctgcggccacttc
acgcaggtcaacgcctggctgcaatcccgaggtcaaacccctattgactggaccagcagc
tttaaaaaaatcccccaacagggagaatttgcgttatga
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integrated database retrieval system
