Bordetella trematum: SAMEA390648701612
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Entry
SAMEA390648701612 CDS
T04322
Symbol
ydcV_1
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
btrm
Bordetella trematum
Pathway
btrm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA390648701612 (ydcV_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
btrm02000
]
SAMEA390648701612 (ydcV_1)
Transporters [BR:
btrm02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SAMEA390648701612 (ydcV_1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
SAI69006
UniProt:
A0A157R9R9
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All DBs
Position
1:1688437..1689249
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AA seq
270 aa
AA seq
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MSRARPKRQWALPLYVAAILLYLLLPLVIVIPMSFSNTSYLAFPPQGLTWRWYGELLRSD
GWINAIYRSLFVAAMSAVVATILGTLASLALARSKRGWTVFMRWLFLGPQVVPVIILALG
VLLLFTRLGLYGSYTGIIIAHSTLALPFVIMATLGVLQQTGESLEKTARVLGASPVQAFW
HVTLPCIAPSVFAGFVFAFFVSFDELVISLFVMAQNETLPMRIWADVRQDLSPVVAVVAT
LLIIVTAMVLVPIELLRRRRAQETDLSKAH
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggcccgacccaaacggcaatgggcattgccgctttatgtggcagcgatcctg
ttgtacctgctgctgccgctggtgatcgtcattcccatgtcgttcagcaatacctcctat
ctcgcctttccgcctcaggggctgacctggcgctggtacggcgaattgttgcgctccgac
ggctggataaacgccatctatcgcagcctgttcgtggcggcgatgtcggcggtggtggcc
accattctgggcacgctcgcctcgctggcgctggcgcgcagcaagagaggctggacggtc
ttcatgcgctggctgttcctcgggccgcaggtcgtgccggtgatcatcctggcgctgggc
gtgctgctgctcttcacgcggctgggcctgtacggctcgtataccggcatcatcatcgcc
cacagcacgctcgcgctgccctttgtgatcatggccacgctgggcgtgctgcaacagacc
ggcgagtcgctggagaagacggcgcgcgtgctgggcgcgagccctgtgcaggctttctgg
catgtcaccttgccgtgcatcgcgccatcggtctttgccggcttcgtgttcgccttcttc
gtgtccttcgacgaactggtgatctccctgttcgtcatggcgcagaacgaaaccctgccc
atgcggatctgggccgacgtgcggcaggacctgtctccggtcgtcgcggtggtggcgacc
ctgctgatcatcgtcaccgccatggtgctggtgccgatcgaactcctgcgccgcaggcgg
gcccaggaaacggatttgagcaaagcgcattga
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