Bordetella trematum: SAMEA390648701647
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Entry
SAMEA390648701647 CDS
T04322
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
btrm
Bordetella trematum
Pathway
btrm02024
Quorum sensing
btrm03060
Protein export
btrm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SAMEA390648701647 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SAMEA390648701647 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA390648701647 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
btrm02044
]
SAMEA390648701647 (ffh)
Enzymes [BR:
btrm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SAMEA390648701647 (ffh)
Secretion system [BR:
btrm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SAMEA390648701647 (ffh)
Eukaryotic Sec-SRP protein
SAMEA390648701647 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
AAA_25
Zeta_toxin
CbiA
NTPase_1
AAA_16
ABC_tran
AAA_18
AAA_19
TsaE
AAA_33
AAA_24
DUF3926
LPD22
Motif
Other DBs
NCBI-ProteinID:
SAI69099
UniProt:
A0A157QH88
LinkDB
All DBs
Position
1:1723117..1724520
Genome browser
AA seq
467 aa
AA seq
DB search
MLDNLTQRLSRVVKTLRGEARLTEANTQEMLREVRMALLEADVALPVVRDFVGRVKEKAL
GEEVAGSLTPGQALVGVVHKELTSLMGGDLGATSGELSLAVQPPAVILMAGLQGAGKTTT
TGKLARWLAEGEHVQNGRKTGKKKVLVVSADVYRPAAIEQLKTVAAQVGVDFLPSDTSQK
PEDIARNAVEHARRHHYDVLIVDTAGRLGIDEAMMREIAALHALVKPVETLFVVDAMQGQ
DAVNTARAFAEALPLTGVVLTKLDGDARGGAALSVRHITGKPLKFVGVSEKLDGLQPFHP
ERMAQRVLGMGDIVSLVEQAQKNIDIAEAQKFAQKIKSGDKFDLNDFREQLGQVKKLGDM
NSLLEKLPAQFQQAASQMQGGQAEKQLRRTEGILNSMTPGERAKPELIKASRKRRIAAGA
GVPVQEVNRLLNQFEQMQGMMKQMKKGGMAKMMRAMGGLKGLGRFGR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgctcgataacttgacccaacgcctgtcgcgcgtcgtaaagacgctgcgcggcgaagcc
cgcctgaccgaggccaacacccaggagatgctgcgcgaagtgcgcatggcgctgctggag
gccgacgtggcgctgcccgtggtgcgcgactttgtggggcgcgtcaaagaaaaggccctg
ggcgaggaggtggccggcagcctgacccccggccaggcgctggtgggcgtggtccacaag
gagctgacctcgctgatgggcggcgacctgggcgcgaccagcggcgaactgtcgctggcg
gtgcagccgcctgcggtcatcctgatggccggcctgcagggcgctggcaagaccacgacc
accggcaagctggcccgctggctcgccgagggcgagcacgtccagaacggccgcaagacc
ggcaagaagaaggtgctggtggtgtcggccgacgtgtatcgtccggcggccatcgagcag
ttgaaaaccgtggcggcccaggtcggcgtggatttcctgccctctgacacgagccagaag
cccgaggacatcgcgcgcaatgccgtcgagcatgcgcgccgccaccactatgacgtgctg
atcgtcgacacggctggccgcctgggtatcgacgaggccatgatgcgcgagatcgccgcg
ctgcatgccttggtcaaaccggtggaaaccctgttcgtggtggatgccatgcaaggccag
gacgcggtcaacactgcgcgtgcctttgccgaggcgctgcccctgacgggcgtggtgctc
accaagctggacggcgatgcgcggggcggcgcggcgctgtcggtgcgccacattaccggc
aagccgctgaagttcgtcggcgtgtcggaaaagctcgatggcctgcagccctttcacccg
gaacgcatggcgcagcgcgtgctgggcatgggcgacatcgtgtcgctggtcgagcaggcc
cagaagaacattgacatcgccgaggcgcagaaattcgcccagaagatcaagtcgggcgac
aagttcgacctgaacgacttccgcgagcagctcggccaggtcaagaagctgggcgacatg
aactcgctgctggagaagctgccggcgcagttccagcaggcggccagccagatgcagggc
gggcaggcggaaaagcagctgcgccgcaccgagggcatcctcaactccatgacgccgggc
gagcgcgccaagcccgagctcatcaaggcctcgcgcaagcgccgcatcgcggccggcgcc
ggcgtgccggtgcaggaggtcaaccgtctgctgaatcagttcgagcagatgcagggcatg
atgaagcagatgaaaaagggcggcatggccaagatgatgcgcgccatgggcggcctgaag
ggcctgggccgcttcggtcgctga
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integrated database retrieval system
