Bordetella trematum: SAMEA390648701789
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Entry
SAMEA390648701789 CDS
T04322
Symbol
bipA_1
Name
(GenBank) outer membrane ligand binding protein
Organism
btrm
Bordetella trematum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_6
IAT_beta
RibLong
Rib
Glucodextran_B
CarbopepD_reg_2
ESPR
Motif
Other DBs
NCBI-ProteinID:
SAI69432
UniProt:
A0A157SG29
LinkDB
All DBs
Position
1:1874034..1879349
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AA seq
1771 aa
AA seq
DB search
MARAAFGLAMKSGAVPRFMSYNVGGFVNRGMDHVIWPQARNAWLVVGEHAISRSRARRVL
SSFLCLSVGAQACLPLAAWGQGAPVLARQRVDETPGGTSVLRQVAGEVQALARREADKGP
GLDGDYLRRQGQAHFNQFLQGGVQAARDSDLPFLRHLQGDLRYDFDRGRTSLELQTIDEI
YRQGPHSGLLQLGAHNQNERPTANVGAIYRREVLDGLLLGANAFVDYEFGKQHGRGSLGW
EALAPQFSLHANLYFPLSAWKGAKRDGRREERPASGMDVGLKFRPAFLPGLELKASHFRW
NGAGVDYFDNGRPQDRATGFKYGVQYRPVPLLSLGLEQDKVMGGARQTRVQLGVAINLSE
PLSKQWRRDRPAPGFSPSRTALVERENRIVLNTRRKHVILPLSITQVSTHQVDGRLTVIG
QTQPRATVTIRMPDGEPGSATADASGRYAYTSRRDQPSGNIVLRASNAEGDSSREVTYHY
LDDVPLGDLQVEVVALLPQPADRALEVQGVTEPMADVRVSFPNGESVGVTADGKGHFRAR
SKRQVAQGQVTVQAVDPRTLKEARAALSYQPPEVIAPTTNEIVTHPDTGRVTLTGTAEPG
TEVTVGFPDGSSRTVRVGATGSFTVTSERDVPAGMITVQATDTAGNRSPEVQHEYVDTVD
KTAPAAPADTKVSTDTTSGRVTVTGSAEPAAHVTVTFPDGSNKRVQADAHGRYTVTSDAD
MPSGTISTRVTDAAGNSGPEARLEYVDTVDKTAPEAPADTKVSTDTTSGRVTVTGSTEPA
AHVTVTFPDGSSKRVQAGADGRYTVTSDADMPSGAINTQVTDASGNKSPEVRHDYVDTVD
KTAPAAPVAAAVTTDSASGRVTVSGTAEPGAEVRVSFPDGTSQTVKADAEGGYTVTSARD
VPSGAIKVQATDASGNKSPEVRREYTDTVDKTPPVAPVASEVTTDSASGRVTVSGTAEPG
AEVRVSFPDGTSQTVSADAAGGYTVISERDLPAGVIKVQATDASGNKSPEVRHEYVDTVD
KTAPAAPADTKVSTDTTSGRVTVTGSTEPAAHVTVTFPDGSNKRVQADTHGRYTVTSDAD
VPSGVISTRVTDAAGNTGPELRHEYTDTVDKTPPAAPVAAGVTTDSVSGRVTVTGTAEPG
AEVRVSFPDGTDQTVKVGAAGSYRVTSERDVPSGMITVQATDTAGNRSPETRHAYVDAVD
KTAPDAPADTEVTTDPASGQVTVSGTAEPGAEVRVSFPDGTSKTVKAGATGSYTVVSDGD
MPSGSITIRATDAAGNNSPEVMRTYTDLVDKTPPPVPTVADVVTDESSGRVTVSGTAEPG
ANVTVALPDGTRKTVKAGTTGGYTVVSDGDMSSGPIRIWATDAAGNNSPELMRTYTDLVD
KTPPPAPKVADVATDETSGQVTVTGTAEPGAQVTVRFPDGTGKTVVAGADGAYRVTSEGD
MVAGDITVSASDASGNKGPQVSKAYVDSVDKTPPPLVITAVTENLDTGQVTVRGDSEPGS
RVTVTFSDGSSKTVVAGDDGAYTATSAGDLPSGSILARAVDEAGNSSAEARHAYVDTVDK
TPPEEPSITSITTNATSGQVTVTGKAEPGADVAVTFPDNTSKKVKADTEGTYTATSDKDV
PSGMVKVLATDAAGNEGEEIDQPYRDERKALSMGNIVSLLAEAGTFRPIEISRASATLAA
YFDVIGVAKPLVRIEPVNPADANVRKLIDLLQVRLQGWRRGVKAGTMYLEKPAGTGPEGT
VPPGDYAVNIIFTDPGIPEAQVVIPGVIRWS
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
ttggccagggcggcgttcggcctggccatgaagagcggcgccgtgcccagattcatgtca
tacaacgtagggggtttcgtgaaccgaggaatggaccatgtcatctggcctcaggcacgt
aatgcatggcttgtcgtcggcgagcacgccatcagccgcagccgtgcccggcgtgtcctg
tcctcgttcctgtgcttgtcagtgggcgcgcaggcatgcctgcctttggcggcatggggt
cagggcgcgcccgttctggccaggcaacgcgtagacgagacaccgggcggtacctctgtg
ctcaggcaggtggccggcgaggtccaggcgctggcgcggcgcgaggcggacaaggggccg
ggcttggacggcgattacctcaggcgccagggacaggcgcatttcaaccaattcctgcaa
ggaggcgtgcaggcggccagggacagcgaccttccctttctgcgtcatttgcagggagac
ttgcggtatgacttcgatcgcggccgcacatcgctggagttgcagacgatcgatgagata
tatcgccagggaccgcattcgggtctgttgcaactgggcgcgcataaccagaatgagcgg
cccacggccaatgtgggcgcgatctaccggcgcgaggtcctcgatggcctgttgctgggc
gccaatgcctttgtcgattacgagttcggcaagcagcacgggcggggctcgctgggctgg
gaggcgctcgcgccgcagttctctttgcatgccaacctctatttccctctgtcggcctgg
aaaggcgccaagcgcgacgggcggcgcgaggagcgtccggcctcgggcatggatgtgggg
ctgaagttcaggccggccttcttgcccgggctggaactcaaggccagccattttcgttgg
aatggcgccggcgttgactatttcgacaatggccgcccgcaagaccgggcaaccggtttc
aagtacggcgtgcaatacaggcccgtgccgttgctgagcctggggctggagcaggacaag
gtgatgggcggcgcacgccagacccgcgtgcagctgggagtggccatcaatctgtcggag
cccttgtccaagcagtggcggcgagataggccggctcccggtttcagtccgtcgcgcacc
gccttggtcgagcgcgagaatcgcattgtcctcaatacgcggcgcaagcatgtcatcctg
ccgctgtccatcacgcaggtctcgacgcatcaggtcgatggacggcttaccgtgatcggg
cagacacagccgcgtgcgacggtgacgatacgcatgccggatggcgagcccggttccgcc
acggccgatgccagcgggcgctatgcctacacgtccaggagggatcagccatcgggcaat
atcgtgctgcgcgccagcaatgccgagggagacagtagccgcgaggtgacttatcactat
ctcgacgatgtgccgctgggggatttgcaggtggaggtggtggcgctgcttcctcagccg
gcagaccgcgcactggaagtgcagggtgtgaccgagcccatggccgatgtccgggtgtct
tttcccaacggcgagtcggtgggcgtgacggccgatggcaaggggcacttccgggcgcgc
tcgaaacggcaagtggcacaagggcaggtgaccgtgcaggcggtcgatccgcgcacgctc
aaggaggcgcgcgcggccttgtcctatcagccgccggaggtcatcgcgccgaccacgaac
gagatcgtgacccatcccgataccggccgggtgacgttgacggggacggcggagccgggg
accgaggtgacggtgggctttccggacggctcgtcccggaccgtcagggtcggcgcgacg
ggaagctttacggtgacctcggagcgtgatgtccctgcggggatgatcacggtgcaggcc
acggacaccgcgggcaacaggagccccgaggtgcagcatgagtacgtcgacacggtggac
aagaccgcgcctgcagcgccggccgacacgaaggtgtcgaccgacaccacctcggggcgt
gtgaccgtgacgggcagcgccgagccggcggcccatgtgacggtgacctttccggatggc
tcgaacaagcgggtgcaggctgacgcgcacgggcgctacacggtgacttcggatgccgat
atgccttcgggcacgatcagtacgcgggtcacggatgccgcgggcaactcgggtcccgag
gcgcgccttgagtacgtcgacacggtggacaagaccgcgcccgaagcgccggccgacacg
aaggtatcgaccgacaccacctcggggcgtgtgaccgtgacgggcagcacggagccggcg
gcccatgtgacggtgacctttccggatggttcgagcaagcgggtgcaggccggcgcggac
gggcgctacacggtgacttcggatgccgatatgccttccggcgcgatcaatacgcaggtc
acggatgcctcgggtaacaagagccctgaggtccggcatgattacgtcgatacggtagac
aagaccgcgccggccgcaccggtggctgccgcggtgacgaccgactccgcctcgggtcgg
gtgacggtgagcggcacggccgagcccggggccgaggtgagagtgagtttcccggatggc
acgagccagaccgtcaaggctgatgcggaaggtggctacacggttacgtcggcgcgcgat
gtaccctcaggtgcgatcaaggtgcaggccacggatgcctcgggcaacaagagccccgag
gtccggcgtgagtacaccgacacggtggacaagaccccgccggtcgcgccggtggcctcc
gaggtgacgaccgactccgcctcgggtcgggtgacggtgagcggcacggccgagcccgga
gccgaggtgagggtgagtttcccggatggcacgagccagaccgtcagcgccgatgcggcg
ggcggctatacggtgatctcggagcgtgatctacctgcgggggtgatcaaggttcaggcc
acggatgcctcgggcaacaagagccctgaggtccggcatgagtacgtcgatacggtggac
aagaccgcgcctgcagcgccggccgacacgaaggtgtcgaccgacaccacctcggggcgt
gtgaccgtgacgggcagcacggagccggccgcccatgtgacggtgacctttccggatggc
tcgaacaaacgggtgcaggccgacacgcacgggcgctacacggtgacttcggatgccgat
gtgccttcgggcgtcatcagtacgcgggtcacggatgccgcgggcaacacggggcccgag
ctgcggcatgagtacaccgacacggtggacaagaccccgccggccgcgccggtggctgcc
ggggtgacgaccgactccgtctcgggccgggtgacggtgacaggcacggccgaacccggg
gccgaggtgagggtgagcttcccggacggcacggatcagaccgtcaaggtcggcgcggcg
ggaagctatagggtgacttcggaacgcgatgtgccctcggggatgatcacggtgcaggcc
acggacaccgcgggcaacaggagccccgagacccgccatgcctacgttgacgcagtggac
aagaccgcgcccgatgcgccggcggatacggaagtgacgaccgatcccgcctcgggccag
gtcacggtgagcggcacggccgagcccggggccgaggtgagagtgagtttcccggatggc
acgagcaagaccgtcaaggcgggcgcgacgggcagctataccgtggtctcagacggcgac
atgccgtcgggctcgatcacgatccgggcgaccgacgccgccggcaacaacagtcccgag
gtgatgcgcacctataccgatctggtggataagacgccaccgccggtccccacggtcgca
gacgtagtgaccgatgagtcgtcgggccgggtgacggtaagcggcacggccgaacccgga
gccaacgtgaccgtggcgctcccggacggcacgcgcaagaccgtcaaggcgggcacgacg
ggcggctataccgtagtttcggacggcgacatgtcgtcggggccgatcaggatctgggcg
accgatgccgccggcaacaacagtcccgagcttatgcgcacctataccgatctggtggat
aaaacgccgccgcctgcgcccaaggtcgcggacgtggcgaccgatgagacgtcgggccag
gtgacagtgacggggacggccgagccgggggcccaggtgacggtgcgctttccggatggc
acgggcaagaccgtcgtggctggcgccgacggcgcctatcgcgtgacttcggagggcgat
atggtggcgggcgacatcacggtgtccgctagcgatgcctcgggcaacaaggggccgcaa
gtcagcaaggcctacgtggacagtgtggacaagacaccgccgccgctggtcatcacggcc
gtgaccgagaacttggatacgggccaggtgaccgtaagaggcgatagcgagccgggatcc
cgggtgaccgtcacgttcagcgatgggtcgagcaaaacggtggtggccggcgatgatggc
gcttacacggcaacttccgccggggatctgccttcggggtcgatcctggcgcgggccgtc
gacgaagcaggcaattcaagcgccgaggcgcggcatgcatacgtcgacacggtggacaag
acgccgcccgaggaaccctcgatcacgtccatcacgaccaatgccacctcggggcaggtg
acggtgacaggcaaagccgagcccggagccgatgtggcggtgaccttcccggacaatacg
agcaagaaggtcaaggccgacacggagggcacgtacacggcgacgtcggataaggacgtg
ccgtcggggatggtgaaggtactcgccacggacgcggcgggcaatgagggcgaagaaatc
gaccagccctacagggatgagaggaaagccctgtccatggggaatatcgtcagcctgctt
gccgaagcagggacattccgaccgattgaaatatccagggcaagcgccacgctggctgcg
tactttgacgtgatcggcgtagcgaagccgctggtccggatcgagccggtgaatccggcc
gatgcgaatgttcgcaagctgatcgacctgttgcaggtgcggctacagggctggcgccgt
ggtgtgaaggcgggcacgatgtacctggagaagcctgccggcacgggtcccgaaggcacg
gttccgccgggggactatgcggtcaacatcatcttcaccgacccagggatccccgaagcc
caggtggtgatccctggggtgatcaggtggtcttga
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