Bordetella trematum: SAMEA390648701878
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Entry
SAMEA390648701878 CDS
T04322
Symbol
cpn60
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
btrm
Bordetella trematum
Pathway
btrm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA390648701878 (cpn60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btrm03019
]
SAMEA390648701878 (cpn60)
03110 Chaperones and folding catalysts [BR:
btrm03110
]
SAMEA390648701878 (cpn60)
03029 Mitochondrial biogenesis [BR:
btrm03029
]
SAMEA390648701878 (cpn60)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
btrm04147
]
SAMEA390648701878 (cpn60)
Enzymes [BR:
btrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SAMEA390648701878 (cpn60)
Messenger RNA biogenesis [BR:
btrm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SAMEA390648701878 (cpn60)
Chaperones and folding catalysts [BR:
btrm03110
]
Heat shock proteins
HSP60 / Chaperonin
SAMEA390648701878 (cpn60)
Mitochondrial biogenesis [BR:
btrm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SAMEA390648701878 (cpn60)
Exosome [BR:
btrm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SAMEA390648701878 (cpn60)
Exosomal proteins of other body fluids (saliva and urine)
SAMEA390648701878 (cpn60)
Exosomal proteins of breast cancer cells
SAMEA390648701878 (cpn60)
Exosomal proteins of colorectal cancer cells
SAMEA390648701878 (cpn60)
Exosomal proteins of bladder cancer cells
SAMEA390648701878 (cpn60)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
SAI69659
UniProt:
A0A157PG95
LinkDB
All DBs
Position
1:complement(1978750..1980390)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKQVLFAEDARVRIVRGVNTLANAVKTTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKFENIGAQLVKDVAAKTSDNAGDGTTTATVLAQAIVQEGLKYVAAGFNPIDLKRGI
DKAVAAAVVELQKISKPVTTSKEIAQVGSISANSDSSIGQIIADAMDKVGKEGVITVEDG
KSLENELDVVEGMQFDRGYLSPYFINNPDKQVAALDDPYVLIFDKKISNIRDLLPVLEQV
AKSSRPLLIIAEDVEGEALATLVVNNIRGILKTTAVKAPGFGDRRKAMLEDIAILTGGTV
ISEETGMSLEKATLQDLGQAKRIEVAKENTTIIDGAGDGKSIEARVKQIRAQIEEATSDY
DREKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALL
RAKQAIAELQGATADQNAGIKLILRAVEEPLRTIVTNAGEEASVVVNNVLNGKGNFGYNA
ATGEYTDLVAQGVLDPTKVTRTALQNAASVASLLLTAEAAVVELAEDKPAAPAMPGGMGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaacaagtactgtttgctgaagacgcccgcgtgcgcatcgtgcgcggcgtg
aacaccctggccaacgcggtcaagaccaccctgggtcccaagggccgcaacgtcgtgctg
gagcgctccttcggcgccccgaccgtgaccaaggacggcgtgtcggttgccaaggaaatc
gaactgaaggacaagttcgagaacatcggcgcccagctggtcaaggacgttgccgccaag
acctcggacaacgccggtgacggcaccaccaccgccaccgtgctggctcaggccatcgtt
caggaaggcctgaagtacgttgccgccggtttcaacccgatcgacctcaagcgcggcatc
gacaaggccgtggccgccgccgtggttgagctgcagaagatctccaagccggtgaccacc
agcaaggaaatcgcccaggttggctcgatctcggccaacagcgacagctccatcggccag
atcatcgctgacgcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaagacggc
aagtcgctggaaaacgagctggacgtcgtcgaaggcatgcaattcgaccgcggctacctg
tcgccctacttcatcaacaacccggacaagcaagttgccgctctggacgatccgtacgtt
ctgatcttcgacaagaagatcagcaacatccgtgatctgctgccggtgctggagcaagtt
gccaagtccagccgtccgctgctgatcatcgccgaagacgtcgaaggcgaagccctggcg
accctggtggtgaacaacatccgtggcatcctgaagaccaccgccgtcaaggccccgggc
ttcggcgatcgtcgcaaggccatgctggaagacatcgccatcctgacgggcggcacggtg
atctccgaagaaaccggcatgtcgctggaaaaggccaccctgcaggacctgggccaagcc
aagcgcatcgaagttgccaaggaaaacaccacgatcatcgacggcgccggcgacggcaag
tcgatcgaggcccgcgtcaagcagatccgcgcccagatcgaagaagcgacctcggactac
gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggcgttgccgtgatccgc
gtcggtgctgccaccgaagtcgaaatgaaggaaaagaaggcccgcgtcgaagacgccctg
cacgcaacccgtgccgcggtggaagaaggcgtggtggctggtggcggcgtggccctgctg
cgtgccaagcaagccatcgccgaactgcaaggcgccactgccgaccagaacgccggtatc
aagctgatcctgcgcgctgtcgaagagccgctgcgcaccatcgtgaccaacgccggcgaa
gaagccagcgtggtggtgaacaacgtcctgaacggcaagggtaacttcggttacaacgcc
gccaccggcgagtacaccgacctggtcgcccagggcgtgctggatcccaccaaggtgacc
cgcaccgcgctgcagaacgccgcttcggtggccagcctgctgctgacggccgaggccgcc
gtggtcgaactggctgaagacaagcccgctgccccggccatgccgggcggcatgggcggc
atgggcggcatggacttctaa
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