Bordetella trematum: SAMEA390648701910
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Entry
SAMEA390648701910 CDS
T04322
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
btrm
Bordetella trematum
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
btrm03009
]
SAMEA390648701910 (dbpA)
Enzymes [BR:
btrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SAMEA390648701910 (dbpA)
Ribosome biogenesis [BR:
btrm03009
]
Prokaryotic type
rRNA helicases
SAMEA390648701910 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-ProteinID:
SAI69735
UniProt:
A0A157PHV4
LinkDB
All DBs
Position
1:2007014..2008531
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AA seq
505 aa
AA seq
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MYRAGVGRLCPHCLKTMRALSGHSKSMPAHTLWADTVFRACPIVTDTSFSSLPLLPALLE
NLQSLGFERMTPIQAQSLPLILEGRDLIAQAKTGSGKTAAFGLGVLQRLDVARLAPQALL
VCPTRELADQVAQELRRLARLIPNVKVLTLCGGAAARPQAESLARGAHLVVGTPGRLQDH
LARGSLDLSALNTLVLDEADRMVDMGFYDDIVAIASHCPVKRQTLLFSATYPDNIRKLSA
RFLRNPAEVKVEAQHDASRIEQVFYEIEEEQRLDAVATLLAHYRPVSTLAFCNTKVRSHD
LVERLQAGGISAQALNGDLEQRERDEILIQFANQSCAVLVATDVAARGLDIQNLGAVINV
DVTKDTEVHVHRIGRSGRGEQKGLALSLCSPEEMRWANLIEEYQGRPLKWADIKALKPKA
DRPLRAPMITLSIQGGKKDKLRPGDLLGALTGDGGLTFEQVGKINITEFTSYVALDRQVA
RAAFERLSNSNIKGRRFRMRFLEDV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
gtgtatcgcgcgggcgtcggccggctctgtccccattgtctgaaaaccatgcgcgccctc
tcgggccacagtaaatccatgccagcgcatacactgtgggccgacactgttttccgggcc
tgccccatcgtgactgatacgtctttttcttccctgcccctgttgccagccttgctggag
aatctgcaaagcctgggctttgaacgcatgacgccgatccaggcgcaaagcctgcccctg
atcctggaggggcgcgatctgatcgcgcaggctaagaccggcagcggcaagacggcagcc
ttcggcctgggcgtgctgcagcgtctggatgtcgcgcggctggcgccgcaggccttgctg
gtctgcccgacccgcgagctggccgatcaggtggcccaggagctgcgtcgcctggcccgg
ctgatcccgaacgtgaaagtgctgacgctgtgcggcggggcggccgcgcgtccgcaggcc
gagtccctggcccggggggcgcatctggtggtgggcacgcccggacgactgcaggatcat
ctggcgcgcggcagcctggacctgtcggcactcaataccctggtgctcgatgaggccgac
cgcatggtcgacatgggcttctacgatgacatcgtggcgattgcctcgcattgccccgtc
aagcgccagacgctgctgttttcggccacctatccggacaacatccgcaaattgtcggcg
cgctttctgcgcaacccggccgaggtcaaggtcgaggcccagcatgacgccagccgcatc
gagcaggtgttctacgagatcgaagaagagcagcgccttgacgccgtggcaacgctgctg
gcgcattaccgccccgtctccacgctggctttctgcaataccaaggtgcgcagccacgat
ctggtcgagcgcctgcaggccgggggcatcagcgcgcaggcgctcaatggcgacctggaa
cagcgcgagcgcgacgagatcctgatccagttcgccaaccagagctgcgccgtgctggtg
gccaccgacgtggccgcgcgtgggctggatatccagaacctgggcgcggtgatcaacgtg
gatgtcaccaaggacaccgaggtgcatgtgcatcgcatcggccgcagcggccggggcgag
cagaaaggcctggcgttgagcctgtgttcgcccgaggaaatgcgctgggccaatctgatc
gaggagtatcagggccggccgctgaagtgggccgacatcaaggcgctcaagcccaaggcg
gatcgtccgctgcgtgcgcccatgatcaccctgagcatccagggcggcaaaaaagacaaa
ctgcgccccggcgacctgctgggcgcgctgaccggcgatggcggcctgaccttcgagcag
gtgggcaagatcaacatcaccgagttcacctcctacgtggccctggaccgccaggtcgcc
cgggcggccttcgagcgcctgtccaacagcaacatcaagggtcggcgctttcgcatgcgc
ttcctggaagacgtatag
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