Bordetella trematum: SAMEA390648702000
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Entry
SAMEA390648702000 CDS
T04322
Symbol
kdgR_3
Name
(GenBank) transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
btrm
Bordetella trematum
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
btrm03000
]
SAMEA390648702000 (kdgR_3)
Transcription factors [BR:
btrm03000
]
Prokaryotic type
Helix-turn-helix
IclR family
SAMEA390648702000 (kdgR_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
Dimerisation
HTH_20
HTH_27
Rrf2
DUF4423
HTH_AsnC-type
HTH_5
HTH_24
HTH_Crp_2
HTH_47
MarR
Motif
Other DBs
NCBI-ProteinID:
SAI69953
UniProt:
A0A157SID9
LinkDB
All DBs
Position
1:complement(2100874..2101671)
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AA seq
265 aa
AA seq
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MNNTLIKGLQVVELLAHSDTPQSLTDIANRLGLAKSNVHRLLIALSELKYVIRDEGSGRY
NASIKLWELGSAVLGKLDLKRHAEHWMSTLKDQTGETVHLSVLDRDEVVYVHKIESDNPI
RAYTQIGGRVPAYCVATGKAMLAYRSAETLQRVTASLVQITPATIAQPKRFLQEIEKIRK
QGYAVNRGEWREGVYGVAAPILDGSGQVIAALGLSGPSTRFRATQIKQFAEKLGRATEGI
TQSLGGHAALPTLAHVTRRMVAAKP
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacacgctcatcaagggtctgcaggtggtcgaactgctggcccacagcgacacc
ccccagagcctgaccgacatcgccaaccggctcgggctggccaagagcaatgtgcaccgc
ctgctgatcgcactgtcggaattgaaatacgtcatccgcgacgagggctcgggccgctac
aacgcctcgatcaaactatgggaactgggttcggcggtgctgggcaagctggatctcaag
cgccatgccgaacactggatgtcgaccctgaaagaccagaccggcgaaaccgtgcatctg
tcggtgctcgaccgcgacgaggtggtctacgtgcacaagatcgaaagcgacaatcccatc
cgggcctacacccagatcggcggccgcgtgccggcctattgcgtggccaccggcaaggcc
atgctggcctatcgctcggccgaaacgctgcaacgcgtgaccgcctcgctggtgcagatc
acgccggccaccatcgcccagcccaagcgctttcttcaggagatcgagaagatccgcaag
cagggctacgcggtcaatcgcggcgaatggcgcgagggcgtctacggcgtggccgccccc
atcctggatggctccggccaggtgatcgccgcgctcggcctgtccggcccgtcgacacgc
tttcgcgcgacccagatcaagcagtttgccgaaaagctcgggcgcgccaccgagggcatt
acccagagcctgggcgggcatgccgcgctgcccaccctggcccatgtgacccgccgcatg
gtggcggccaagccctga
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