Bordetella trematum: SAMEA390648702230
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Entry
SAMEA390648702230 CDS
T04322
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
btrm
Bordetella trematum
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
btrm03036
]
SAMEA390648702230 (xerD)
Chromosome and associated proteins [BR:
btrm03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
SAMEA390648702230 (xerD)
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Integrase_1
Phage_integr_3
Motif
Other DBs
NCBI-ProteinID:
SAI70485
UniProt:
A0A157SJB3
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All DBs
Position
1:2338259..2339185
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AA seq
308 aa
AA seq
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MSDTSVLVSQADIDAFIQALWLEDGLAANTLAAYRRDLSAFARWLQAPEAPPGAAGQLCE
ASAADLAAWFAACHEDSRPATANRRLATLRRFFAWALREGRCAADPCLSLEAARQPLRVP
KTLSEGQVEALLQAPDLSLARGLRDRAMLETLYATGVRVTELVSLRTLDVSLADGVLRVV
QGKGGRDRLVPLGAEAAHWLQRYLEQARAELAGARVSDALFITARAQAMSRQAFWQLVKK
YARVADVQAPLSPHVLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKSL
HAAHHPRA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacacctctgtcctggtttctcaggccgacatcgatgccttcatccaggccctc
tggctggaagacggcctggccgccaacacgctggcggcctaccgccgcgacctgagcgcc
tttgcccgctggctgcaggccccagaggcgccgcccggggccgccggccagctgtgcgag
gccagcgcggcggacctggcggcctggttcgccgcctgccacgaggacagccggccagcc
acggccaaccgccggctggccaccctgcggcgcttcttcgcctgggccttgcgcgagggg
cgctgcgccgccgatccctgcctgagcctggaggccgcgcgccagcccctgcgcgtgccc
aagacgctttcagaaggccaggtcgaggcgctgttgcaggctcctgatctgtcgctggcg
cgcgggctgcgtgaccgcgccatgctggagacgctctacgccaccggcgttcgcgtgacc
gaactggtcagtttgcgcacgctcgatgtcagcctggccgacggcgtattgcgcgtggtg
cagggcaagggcggacgcgaccggctggtgccgctgggcgccgaggcggcacactggctg
cagcgctatctggagcaggcccgtgccgagctggccggtgcgcgcgtcagcgatgcgctg
ttcatcaccgcgcgcgcccaggccatgtcgcgccaggcgttctggcaactggtcaagaag
tacgcccgggtcgccgatgtccaggcgccgttgtcgccgcatgtgctgcgccacgccttc
gcgacccacctgctgaaccatggtgccgatctgcgcgtggttcagctgttgctgggccat
gccgacatctccaccacccagatctacacccatgtggcgcgcgagcggctcaagtcgctg
cacgccgcgcatcacccgcgcgcctga
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