Bordetella trematum: SAMEA390648702253
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Entry
SAMEA390648702253 CDS
T04322
Name
(GenBank) beta-hydroxylase
KO
K12979
beta-hydroxylase [EC:1.14.11.-]
Organism
btrm
Bordetella trematum
Pathway
btrm00540
Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SAMEA390648702253
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
btrm01005
]
SAMEA390648702253
Lipopolysaccharide biosynthesis proteins [BR:
btrm01005
]
Lipid A
SAMEA390648702253
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp_Arg_Hydrox
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
SAI70535
UniProt:
U3PX32
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All DBs
Position
1:2363970..2364866
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AA seq
298 aa
AA seq
DB search
MKWFILALFIVTAIVVHYRGRVRHRFSRQVLDHSTFTAPINVFMYAFSGVPNQPYLDLKL
FPEVKVLMDRWEDIRAEAEQLFGDGHIKASDKYNDAGFNSFFKSGWKRFYLKWYDTDHPS
ARALCPVTTELVGRIPGMKAAMFTALPPGSRLPRHRDPYAGSLRFHMGLMTPNSPDCYIS
VDGQNYYWRDGEAVIFDETYIHYAENKTDQNRIILFCDLQRPMKYRWAQAVNNFFGAILL
RAAASPNQEGDRTGGINRIFGAVYAVRRFGKGIKKKNKTLYYVLKWLLVIGIFALIFL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggttcatactcgccctgttcatcgtcacggccatcgtggtgcactaccgcggc
cgcgtgcggcacagattttcgcgccaggtactggatcattcgacgttcacggcccccatc
aacgtgttcatgtacgccttctcgggcgtgccgaaccagccttatctcgatctgaaactc
tttcccgaggtcaaggtgctgatggaccgctgggaagatatccgtgccgaggccgagcaa
ctgttcggcgacggccatatcaaggcttccgacaagtacaacgacgccggcttcaattcg
ttcttcaagagcggctggaagcgtttctacctcaagtggtatgacaccgaccatccctcg
gcccgcgccctgtgcccggtgaccaccgagctggtcggccgcatccccggcatgaaggcg
gcgatgttcacggccctgcctcccggcagccggttgccgcgccatcgcgatccgtatgcc
ggttcgctgcggtttcatatgggcctgatgacgcccaacagtccggattgctacatcagc
gtcgacggccagaattattactggcgcgatggcgaggcggtgatcttcgacgaaacctat
attcactacgccgaaaacaagaccgaccagaaccgcatcatcctgttctgcgacttgcag
cgtcccatgaagtatcgttgggcgcaggcggtgaacaacttctttggcgccattctgctg
cgtgcggcggcctcgcccaaccaggaaggcgaccgtaccggcggcatcaaccgcattttc
ggggcggtgtatgcggtgcgccgcttcggcaagggcatcaagaagaagaacaaaacgctg
tattacgtcctgaagtggttgctggtgatcggcatctttgcgctgatcttcctgtga
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