Bordetella trematum: SAMEA390648702422
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Entry
SAMEA390648702422 CDS
T04322
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulator
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
btrm
Bordetella trematum
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
btrm03000
]
SAMEA390648702422 (prpR)
Transcription factors [BR:
btrm03000
]
Prokaryotic type
Helix-turn-helix
Other families
SAMEA390648702422 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
PAS_8
PAS
PAS_4
AAA_5
PAS_9
PAS_7
Mg_chelatase
HTH_Tnp_ISL3
AAA_16
HTH_30
HTH_23
AAA
AAA_7
HTH_17
HTH_24
Motif
Other DBs
NCBI-ProteinID:
SAI70747
UniProt:
A0A157NCS8
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All DBs
Position
1:2538663..2540603
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AA seq
646 aa
AA seq
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MLPFPAPPDAESAALPRIWAVGVARISRTFAQILPRYAGRGEFKLIEAGFETAATAINEA
ARQGRLDAVVAAGLNGSYLRRHVTVPVVQLKISGFEVMNALATARRISPRVALLGQEAQY
PDLDTFMRTFAVGIPVRTYRDQDDALAQAKVLKDEGIEVLVGSGLIVDYADRMGLAGVLV
YSLDTVAACIEDAIEISRLQRIESGRREYLNAVLANLDEGVAAVDASGRVQALNPAVERL
LGISAAGLAGRRLEEISPALSLDEVLRSGKREAESVHRLAGKMVVVNRIPLAIGGGVSGA
VLTLQEAGAIHRADRSLRTRARARANTVRYTLDDLFGTSAALEKARMLARRYARVDSTVL
IGGESGTGKEVLAQGMHQASARHHFPFIAVNCAAFPENLLESELFGYEDGAFSGARRGGK
PGLFESAHNGTLFLDEVGDMPAALQIRLLRVLQERQVLPVGGIEPVPVNVRIIAATHRDL
PAMVAAGEFRQDLFFRLNILRIDMPTLRERREDIWPLAQRLYERVQQTLGLGPRMPLPAS
AEAALLGYAWPGNIRELENVLERLAVYLAGHDADLPEAQVRRILADVAPELALAARAAPE
DLARHGRRQQAAHIREVLARCGGDRRAACELLGISPTTLWRRLRES
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
gtgctgccctttcccgccccgccggatgccgagtccgccgccctgccgcgcatctgggcc
gtcggggtggcgcgcatctcgcgcacctttgcgcagatcctgccgcgctacgccgggcgc
ggcgagttcaagctgatcgaagccggcttcgagactgccgccacggccatcaacgaggcc
gcccgtcagggccggctggatgcggtggtggccgccggcctgaacggcagctatctgcgc
cgccatgtgacggtgcccgtggtgcagctcaagatcagcggcttcgaggtgatgaacgcc
ctggccacggcgcgccgcatctcgccgcgcgtggccctgctgggccaggaggcgcagtac
cccgatctggatactttcatgcgcacgtttgcggtgggcattccggtgcgcacctaccgt
gaccaggacgatgcgctggcccaggcgaaggtgctcaaggacgagggcatcgaagtgttg
gtgggctcgggcctgatcgtggactacgcggaccgcatgggcctggccggcgtgctggtg
tactcgctggatacggtggcggcctgcatcgaggatgccatcgagatctcccgcctgcag
cgcatcgagtccgggcggcgcgagtacctgaacgcggtgctggccaatctggatgagggc
gtggcggcggtggacgcttcgggccgggtgcaggcgctcaacccggcggtcgagcgcctg
ctgggcatcagcgcggccgggctggccgggcggcgtctggaagagatttcgccggcgctc
tcgctggacgaggttctgcgcagcggcaagcgcgaagccgaatccgtgcatcggctggcc
ggcaagatggtggtggtcaaccggattccgctggccatcgggggcggggtatcgggggcg
gtcctgactctgcaggaggctggcgccatccatcgcgccgaccgcagcctgcgcacccgg
gcgcgggcgcgcgccaacacggtgcgctataccctggacgacctgttcggcacctcggcg
gccctggagaaggcacgcatgctggcgcggcgctatgcccgggtggactcgaccgtgctg
atcggcggggaaagcggcaccggcaaggaggtgctggcccagggcatgcaccaggccagc
gcgcgccatcactttcccttcatcgcggtcaactgcgcggcctttccggaaaacctgctc
gaaagcgaattgttcggctatgaggacggcgccttcagcggcgcgcgccggggcgggaaa
ccgggcctgttcgagtcggcccacaacggcacgctgttcctggacgaggtcggcgacatg
ccggcggcgttgcagatccgcctgctgcgggtgctgcaggaacgccaggtgctgccggtg
ggcggcatcgagccggtgccggtcaacgtgcgcatcatcgccgccacgcatcgcgatctg
cccgccatggtggcggccggcgagttccgccaggatctgttcttccgcctgaacatcctg
cgcatcgacatgcccaccctgcgcgagcgccgcgaagacatatggccgctggcccagcgc
ctttacgagcgcgtgcagcagacgctggggctggggccgcgcatgccgttgccggccagt
gccgaggcggcgctgctgggctacgcctggcccggcaacatccgcgagctggaaaatgtg
ctggagcggctggcggtctacctggccggccatgatgcggatctgcccgaagcgcaggtg
cgtcgcatcctggccgacgtggcgccggagctggcgctggccgcccgggccgcgcccgag
gatctggcccggcatgggcggcgccagcaggcggcccatatccgcgaggtgctggcgcgc
tgtggcggcgaccggcgcgccgcctgcgagctcctgggcatcagcccgaccacgctgtgg
cggcgtctgcgcgaaagctag
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